Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 RN7SKP81-201ENST00000365603 331 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL133388.1-201ENST00000404509 287 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL513325.1-201ENST00000417716 1034 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 RPL12P17-201ENST00000432393 498 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL391987.1-201ENST00000441025 200 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC009963.4-201ENST00000448535 339 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC092754.1-201ENST00000472975 479 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 EIF1P7-201ENST00000487533 337 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 RN7SL547P-201ENST00000490793 290 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 RPSAP51-201ENST00000497462 645 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 IGBP1P4-201ENST00000503202 879 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 HMGB1P44-201ENST00000508597 572 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 BLZF2P-201ENST00000553776 1130 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 RBM22P1-201ENST00000578589 1214 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC010245.2-201ENST00000606908 1167 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AC244107.2-201ENST00000611773 76 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 uc_338.7-201ENST00000621834 124 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 SAMM50P1-201ENST00000455403 1399 ntBASIC5.5□□□□□ -1.53
HLA-DQB2P05538 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DQB2P05538 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 RNA5SP335-201ENST00000363817 110 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 HMGN1P9-201ENST00000515212 298 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 IGLVIV-64-201ENST00000518581 301 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 SUGT1P3-202ENST00000604259 383 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AL162574.1-201ENST00000615702 950 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 CASC19-248ENST00000641674 1356 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 OFD1P17-201ENST00000437639 3018 ntBASIC5.49□□□□□ -1.53
HLA-DQB2P05538 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DQB2P05538 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms