Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL2A1P02458 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.38□□□□□ -1.39
COL2A1P02458 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL2A1P02458 RNU1-43P-201ENST00000365052 165 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL2A1P02458 SNORA70.9-201ENST00000384370 135 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 SNORD56.6-201ENST00000384569 71 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 RPL7P56-201ENST00000429441 717 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 LINC02210-201ENST00000444561 288 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.38□□□□□ -1.39
COL2A1P02458 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.38□□□□□ -1.39
COL2A1P02458 AC109464.1-201ENST00000511091 819 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 GAPDHP62-201ENST00000515313 990 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 RNA5SP373-201ENST00000517271 95 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.38□□□□□ -1.39
COL2A1P02458 AC013701.1-201ENST00000522657 465 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.38□□□□□ -1.39
COL2A1P02458 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.38□□□□□ -1.39
COL2A1P02458 AC137768.1-201ENST00000549998 553 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.38□□□□□ -1.39
COL2A1P02458 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.38□□□□□ -1.39
COL2A1P02458 AP000769.2-201ENST00000602344 396 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.38□□□□□ -1.39
COL2A1P02458 AL078621.3-201ENST00000623707 2042 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL2A1P02458 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 ZNF969P-201ENST00000510345 2341 ntBASIC6.38□□□□□ -1.39
COL2A1P02458 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.38□□□□□ -1.39
COL2A1P02458 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.37□□□□□ -1.39
COL2A1P02458 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.37□□□□□ -1.39
COL2A1P02458 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.37□□□□□ -1.39
COL2A1P02458 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL2A1P02458 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.37□□□□□ -1.39
COL2A1P02458 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.37□□□□□ -1.39
COL2A1P02458 CEACAMP7-201ENST00000444105 496 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 AC110775.1-201ENST00000513721 462 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.37□□□□□ -1.39
COL2A1P02458 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.37□□□□□ -1.39
COL2A1P02458 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 YWHABP2-201ENST00000540201 713 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.37□□□□□ -1.39
COL2A1P02458 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 OR11H3P-201ENST00000554547 982 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.37□□□□□ -1.39
COL2A1P02458 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.37□□□□□ -1.39
COL2A1P02458 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.37□□□□□ -1.39
COL2A1P02458 AC011447.4-201ENST00000587562 111 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 AL022394.1-201ENST00000606979 292 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 AP002799.1-201ENST00000623552 423 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 AC135068.5-201ENST00000624197 983 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.37□□□□□ -1.39
COL2A1P02458 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 AC114947.2-201ENST00000565748 2125 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 AC018809.2-201ENST00000602436 3823 ntBASIC6.37□□□□□ -1.39
COL2A1P02458 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL2A1P02458 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL2A1P02458 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
COL2A1P02458 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.36□□□□□ -1.39
COL2A1P02458 Z92846.1-201ENST00000456203 268 ntBASIC6.36□□□□□ -1.39
COL2A1P02458 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 AC006463.2-201ENST00000473326 348 ntBASIC6.36□□□□□ -1.39
COL2A1P02458 AC090114.3-201ENST00000479267 829 ntBASIC6.36□□□□□ -1.39
COL2A1P02458 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
COL2A1P02458 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.36□□□□□ -1.39
COL2A1P02458 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.36□□□□□ -1.39
COL2A1P02458 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.36□□□□□ -1.39
COL2A1P02458 FAM25E-202ENST00000608562 189 ntBASIC6.36□□□□□ -1.39
COL2A1P02458 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.36□□□□□ -1.39
COL2A1P02458 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL2A1P02458 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.36□□□□□ -1.39
COL2A1P02458 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.36□□□□□ -1.39
COL2A1P02458 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms