Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC010323.2-201ENST00000596405 594 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 RN7SL778P-201ENST00000607160 297 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 RN7SL680P-201ENST00000620379 299 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 MAPK10-285ENST00000641207 2746 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXA2O43364 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 AL445250.1-203ENST00000641829 1535 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
HOXA2O43364 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXA2O43364 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC016831.3-201ENST00000446451 1723 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 XRCC6P2-201ENST00000457831 1822 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 Y_RNA.97-201ENST00000363094 102 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 RNU6-839P-201ENST00000363347 108 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 TMSB4XP8-201ENST00000402089 135 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 TMSB4XP6-201ENST00000415187 135 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 SNRPEP10-201ENST00000420249 274 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 TMSB4XP1-201ENST00000424567 135 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL138787.1-202ENST00000437804 898 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AL512605.1-202ENST00000441919 381 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 LIN28AP2-201ENST00000445283 458 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 YWHAQP9-201ENST00000445891 512 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AL451074.4-201ENST00000447545 470 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC140076.1-201ENST00000449897 361 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC108463.1-201ENST00000450258 347 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC092570.2-201ENST00000452117 1143 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 RN7SL688P-201ENST00000471754 275 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 ACTR3P3-201ENST00000480448 893 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC114981.1-201ENST00000503897 678 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.17□□□□□ -1.1
HOXA2O43364 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 RNU6-1281P-201ENST00000516223 105 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 AC073488.8-201ENST00000631952 757 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.17□□□□□ -1.1
HOXA2O43364 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HOXA2O43364 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
HOXA2O43364 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 FARSBP1-201ENST00000435808 1778 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HOXA2O43364 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.17□□□□□ -1.1
HOXA2O43364 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.17□□□□□ -1.1
HOXA2O43364 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HOXA2O43364 AL133320.1-201ENST00000621423 2352 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms