Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.99□□□□□ -1.45
O00370 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.99□□□□□ -1.45
O00370 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 AC087672.1-201ENST00000479876 766 ntBASIC5.99□□□□□ -1.45
O00370 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.99□□□□□ -1.45
O00370 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.99□□□□□ -1.45
O00370 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.99□□□□□ -1.45
O00370 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.99□□□□□ -1.45
O00370 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.99□□□□□ -1.45
O00370 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.99□□□□□ -1.45
O00370 IGBP1P1-201ENST00000554337 1009 ntBASIC5.99□□□□□ -1.45
O00370 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.99□□□□□ -1.45
O00370 AC010547.6-201ENST00000571789 193 ntBASIC5.99□□□□□ -1.45
O00370 MIR3614-201ENST00000581261 86 ntBASIC5.99□□□□□ -1.45
O00370 AC008521.2-201ENST00000591021 259 ntBASIC5.99□□□□□ -1.45
O00370 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 AL357153.4-201ENST00000620487 1016 ntBASIC5.99□□□□□ -1.45
O00370 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.99□□□□□ -1.45
O00370 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.99□□□□□ -1.45
O00370 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.99□□□□□ -1.45
O00370 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.99□□□□□ -1.45
O00370 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
O00370 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.99□□□□□ -1.45
O00370 AP001029.2-203ENST00000589795 4910 ntBASIC5.99□□□□□ -1.45
O00370 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
O00370 AC239868.2-201ENST00000564237 4527 ntBASIC5.98□□□□□ -1.45
O00370 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
O00370 GAPDHP24-201ENST00000328713 983 ntBASIC5.98□□□□□ -1.45
O00370 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.98□□□□□ -1.45
O00370 AC005042.1-201ENST00000393397 800 ntBASIC5.98□□□□□ -1.45
O00370 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
O00370 RMRPP5-201ENST00000411156 267 ntBASIC5.98□□□□□ -1.45
O00370 RNF10P1-201ENST00000418589 369 ntBASIC5.98□□□□□ -1.45
O00370 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 AC113412.1-201ENST00000425840 504 ntBASIC5.98□□□□□ -1.45
O00370 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.98□□□□□ -1.45
O00370 AC064862.4-201ENST00000442180 334 ntBASIC5.98□□□□□ -1.45
O00370 HMGN1P36-201ENST00000446623 298 ntBASIC5.98□□□□□ -1.45
O00370 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.98□□□□□ -1.45
O00370 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.98□□□□□ -1.45
O00370 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.98□□□□□ -1.45
O00370 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.98□□□□□ -1.45
O00370 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
O00370 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.98□□□□□ -1.45
O00370 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.98□□□□□ -1.45
O00370 MIR4311-201ENST00000580794 100 ntBASIC5.98□□□□□ -1.45
O00370 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.98□□□□□ -1.45
O00370 AC087468.1-201ENST00000604365 630 ntBASIC5.98□□□□□ -1.45
O00370 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.98□□□□□ -1.45
O00370 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.98□□□□□ -1.45
O00370 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.98□□□□□ -1.45
O00370 AL390318.1-201ENST00000624564 687 ntBASIC5.98□□□□□ -1.45
O00370 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.98□□□□□ -1.45
O00370 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
O00370 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
O00370 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 AL929601.4-201ENST00000613011 1341 ntBASIC5.98□□□□□ -1.45
O00370 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
O00370 UGT2B24P-201ENST00000514441 1597 ntBASIC5.97□□□□□ -1.45
O00370 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
O00370 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
O00370 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
O00370 AC002525.1-201ENST00000624392 1622 ntBASIC5.97□□□□□ -1.45
O00370 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
O00370 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
O00370 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.97□□□□□ -1.45
O00370 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
O00370 RNA5SP46-201ENST00000362370 120 ntBASIC5.97□□□□□ -1.45
O00370 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
O00370 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
O00370 AL596448.1-201ENST00000415024 392 ntBASIC5.97□□□□□ -1.45
O00370 BMS1P17-202ENST00000416720 316 ntBASIC5.97□□□□□ -1.45
O00370 Z84478.1-201ENST00000438230 1219 ntBASIC5.97□□□□□ -1.45
O00370 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.97□□□□□ -1.45
O00370 RPL36AP39-201ENST00000445859 318 ntBASIC5.97□□□□□ -1.45
O00370 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.97□□□□□ -1.45
O00370 AC138866.2-201ENST00000508650 584 ntBASIC5.97□□□□□ -1.45
O00370 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.97□□□□□ -1.45
O00370 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.97□□□□□ -1.45
O00370 GAPDHP62-201ENST00000515313 990 ntBASIC5.97□□□□□ -1.45
O00370 RN7SKP253-201ENST00000516424 309 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms