Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC28A1O00337 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC28A1O00337 AC118758.1-202ENST00000454719 225 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC28A1O00337 RPSAP37-201ENST00000470913 821 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC28A1O00337 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC28A1O00337 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC28A1O00337 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC079064.1-201ENST00000528365 362 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC28A1O00337 AC026826.3-201ENST00000561747 158 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC019322.1-201ENST00000571869 389 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC009303.3-201ENST00000591103 736 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC28A1O00337 AC063977.5-201ENST00000601044 974 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC117490.2-201ENST00000610042 594 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 OR8G7P-201ENST00000616658 848 ntBASIC5.4□□□□□ -1.54
SLC28A1O00337 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.4□□□□□ -1.55
SLC28A1O00337 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC28A1O00337 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SLC28A1O00337 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 AC068870.1-201ENST00000563737 2455 ntBASIC5.4□□□□□ -1.55
SLC28A1O00337 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.4□□□□□ -1.55
SLC28A1O00337 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
SLC28A1O00337 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC28A1O00337 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SLC28A1O00337 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC28A1O00337 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.4□□□□□ -1.55
SLC28A1O00337 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC28A1O00337 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SLC28A1O00337 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC28A1O00337 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC28A1O00337 MT-RNR2-201ENST00000387347 1559 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 GAPDHP24-201ENST00000328713 983 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 RNU6-697P-201ENST00000363348 107 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC240504.1-201ENST00000395709 845 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 RAB5CP1-201ENST00000395972 580 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL035696.2-201ENST00000407941 709 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL035660.1-201ENST00000422041 222 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC007679.3-201ENST00000434035 414 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 SNRPFP2-201ENST00000440710 251 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC28A1O00337 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 AZGP1P2-201ENST00000454506 345 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC28A1O00337 HMGN1P8-201ENST00000463578 288 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC022215.1-201ENST00000481770 362 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 RPSAP51-201ENST00000497462 645 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC28A1O00337 NENFP3-201ENST00000503735 313 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC28A1O00337 OR5H7P-201ENST00000514084 930 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC28A1O00337 Y_RNA.667-201ENST00000516212 107 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC28A1O00337 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC28A1O00337 AC006512.2-201ENST00000543250 486 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL121839.1-201ENST00000556233 1185 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 uc_338.7-201ENST00000621834 124 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AC129778.1-202ENST00000623812 261 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL683826.1-201ENST00000624104 627 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AL591379.1-207ENST00000635982 261 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC28A1O00337 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC28A1O00337 AL442128.2-201ENST00000620246 1824 ntBASIC5.39□□□□□ -1.55
SLC28A1O00337 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC28A1O00337 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC28A1O00337 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SLC28A1O00337 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC28A1O00337 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SLC28A1O00337 AC010266.2-201ENST00000564741 3255 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SLC28A1O00337 TMSB4XP2-201ENST00000335179 210 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 RNA5SP477-201ENST00000362639 119 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 SNORA5.1-201ENST00000384275 131 ntBASIC5.38□□□□□ -1.55
SLC28A1O00337 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms