Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC244502.2-201ENST00000543361 851 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 FO393422.1-201ENST00000603908 708 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL589674.2-201ENST00000604304 337 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC239803.2-201ENST00000610161 430 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC008833.1-201ENST00000611633 691 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC022467.1-201ENST00000614738 749 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 RN7SL544P-201ENST00000617232 284 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 RN7SL763P-201ENST00000620922 284 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC104820.1-201ENST00000624183 307 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL139254.3-201ENST00000641097 674 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 RNA5SP46-201ENST00000362370 120 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 RNU6-670P-201ENST00000364312 104 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 GNG5P2-201ENST00000372054 207 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 SNORA70.9-201ENST00000384370 135 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 MARK2P12-201ENST00000420129 585 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AL662874.1-201ENST00000426065 230 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AC022215.1-201ENST00000481770 362 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 RPS4XP14-201ENST00000493072 781 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AC007225.2-201ENST00000562529 256 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 MIR4260-201ENST00000583107 67 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 AL512624.1-201ENST00000613638 469 ntBASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA3F8WFD2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 DDX18P6-201ENST00000450119 1997 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 MIR143-201ENST00000385300 106 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 Z68694.1-201ENST00000413929 841 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 MTCO1P51-201ENST00000427672 1060 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 RN7SL177P-201ENST00000476596 299 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 OR7E157P-201ENST00000494376 911 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 EIF3LP3-201ENST00000495197 822 ntBASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.25□□□□□ -1.57
NPIPA3F8WFD2 AC074087.1-201ENST00000512059 724 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms