Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC079298.2-201ENST00000623885 459 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AL683826.1-201ENST00000624104 627 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 PDZK1P1-202ENST00000425209 1350 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL035405.1-201ENST00000400795 710 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RPL7P58-201ENST00000402913 758 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 TUBB4BP6-201ENST00000437576 479 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC009963.3-201ENST00000458090 486 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RPS23P2-201ENST00000463671 415 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RN7SL197P-201ENST00000466981 299 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 STRADBP1-201ENST00000478954 1281 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC093663.2-201ENST00000484625 313 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AK4P6-201ENST00000505168 528 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC010468.3-201ENST00000508225 458 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 SCARNA18.1-201ENST00000516330 83 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RN7SKP253-201ENST00000516424 309 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 VTA1P2-201ENST00000520205 911 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL845552.1-201ENST00000556820 323 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC092868.3-201ENST00000560515 784 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 LINC00556-201ENST00000569603 412 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC015911.5-201ENST00000587076 451 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC090330.1-201ENST00000588646 764 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC006116.7-201ENST00000590141 756 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC007842.1-201ENST00000597336 2039 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AL355816.2-201ENST00000610049 647 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC097460.3-201ENST00000623099 442 ntBASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.78□□□□□ -1.48
TCRBV7S3A2A0A539 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 RNU1-150P-201ENST00000362491 162 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 RNA5SP477-201ENST00000362639 119 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 GCNT6-201ENST00000379591 934 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 MIR620-201ENST00000385232 95 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AL121882.1-201ENST00000422893 417 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC126120.1-201ENST00000431082 470 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC007679.3-201ENST00000434035 414 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AMYP1-201ENST00000440059 1023 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AC023271.1-201ENST00000445936 1090 ntBASIC5.77□□□□□ -1.49
TCRBV7S3A2A0A539 AP002345.1-201ENST00000456493 928 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 877.4 ms