Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 RAD1P1-201ENST00000231383 813 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 MIR375-201ENST00000362103 64 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 OR13C3-201ENST00000374781 1108 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL096829.1-201ENST00000413677 457 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 BMS1P13-201ENST00000417301 885 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL606495.1-201ENST00000422100 813 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SETP9-201ENST00000423837 832 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 MTND4LP13-201ENST00000425022 298 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 PRUNEP1-201ENST00000425846 705 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 BMS1P10-201ENST00000443754 1120 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AP000281.1-201ENST00000444036 316 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC092106.1-201ENST00000444291 373 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 RPL32P14-201ENST00000463196 378 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC114728.1-201ENST00000488289 483 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 GTF2IP9-201ENST00000502460 301 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 NPM1P27-201ENST00000502784 830 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 SNORA70.20-201ENST00000516848 126 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 CYCSP22-201ENST00000517555 339 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 OR4A17P-201ENST00000526032 904 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AL121594.4-201ENST00000556211 1196 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC010547.6-201ENST00000571789 193 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AP000484.1-201ENST00000620067 1252 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC015722.2-201ENST00000622210 551 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC116667.2-201ENST00000641075 823 ntBASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC187A0A096LP49 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 OR11H13P-201ENST00000359695 979 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms