Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RCL1Q9Y2P8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RCL1Q9Y2P8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.56□□□□□ -1.68
RCL1Q9Y2P8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.56□□□□□ -1.68
RCL1Q9Y2P8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 SMG1P4-204ENST00000523028 4131 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC007618.1-201ENST00000366455 732 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 PPIAP9-201ENST00000403866 498 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 RIMKLBP2-201ENST00000424737 654 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 RPL7P56-201ENST00000429441 717 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 WDR82P2-201ENST00000444540 928 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 NPM1P19-201ENST00000450070 712 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AZGP1P2-201ENST00000454506 345 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC093166.4-201ENST00000457867 318 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 MYL12BP2-201ENST00000503948 512 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AP001960.1-201ENST00000506494 658 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 MRPS5P3-201ENST00000515577 166 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 RNU4-18P-201ENST00000516751 149 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC020937.1-201ENST00000519677 1013 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 TRIM51DP-201ENST00000529746 596 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC040958.1-201ENST00000561102 201 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 MTCYBP13-201ENST00000578634 1093 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 RN7SL66P-201ENST00000582099 264 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 MIR4701-201ENST00000583094 63 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 PRPF19P1-201ENST00000584766 898 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 SNORA35B-201ENST00000607417 129 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 OR51C1P-201ENST00000608504 942 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC006484.1-201ENST00000435086 1884 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 LYARP1-201ENST00000436977 1501 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 AC100757.1-201ENST00000616872 1835 ntBASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.55□□□□□ -1.68
RCL1Q9Y2P8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 RN7SKP184-201ENST00000362348 333 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 RNU1-146P-201ENST00000364015 165 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 OR1L6-202ENST00000373684 1044 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 OR13C3-201ENST00000374781 1108 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 RNU6-1263P-201ENST00000384601 106 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 MIR188-201ENST00000385034 86 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 AC016739.1-201ENST00000405359 345 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 AL357752.1-201ENST00000412817 349 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 NIFKP3-201ENST00000417799 865 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 AC023141.3-201ENST00000436698 278 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 AC090804.1-201ENST00000448870 490 ntBASIC4.54□□□□□ -1.68
RCL1Q9Y2P8 PRPF38AP1-201ENST00000451976 933 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms