Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AL365217.1-201ENST00000398578 2436 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 TXNP5-201ENST00000441043 315 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AP000797.2-201ENST00000475768 606 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ENPP7P9-201ENST00000514456 627 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MIR2117-201ENST00000516780 80 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 YWHABP2-201ENST00000540201 713 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC144833.1-201ENST00000567953 4089 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 AC106871.1-201ENST00000568324 3102 ntBASIC2.17□□□□□ -2.06
MACF1Q9UPN3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC2.17□□□□□ -2.06
MACF1Q9UPN3 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 PTCD2P2-201ENST00000415579 1095 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SLC9B1P4-201ENST00000421957 1288 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RPL37P1-201ENST00000432310 284 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC090948.1-201ENST00000607464 549 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 OR52B5P-204ENST00000641744 3467 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC114774.1-201ENST00000507410 1770 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 MIR551A-201ENST00000385042 96 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL023284.3-201ENST00000407767 334 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RN7SL703P-201ENST00000578485 302 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 GTF2IP6-201ENST00000583143 541 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC016831.4-201ENST00000438302 307 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TXNP2-201ENST00000443918 295 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CCNG2P1-201ENST00000549521 1000 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AGGF1P6-201ENST00000569213 976 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms