Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL158152.1-201ENST00000602652 1435 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RNU6-673P-201ENST00000365084 104 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RNA5SP30-201ENST00000365552 115 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RPS6P23-201ENST00000413224 722 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RPL12P39-201ENST00000455456 496 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RN7SL177P-201ENST00000476596 299 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RN7SL214P-201ENST00000487317 265 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RN7SL184P-201ENST00000488308 297 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 PDCL3P4-201ENST00000489621 720 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 NPM1P21-201ENST00000513394 762 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 MRPS21P7-201ENST00000566937 238 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 RBM22P12-201ENST00000567098 1255 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 AC006115.2-201ENST00000596823 202 ntBASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CLIP2Q9UDT6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 AC016745.2-201ENST00000608834 3443 ntBASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 AL137141.1-201ENST00000624622 4836 ntBASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CLIP2Q9UDT6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AC011933.2-201ENST00000578539 2790 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AC138761.5-201ENST00000433967 325 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AL450023.1-201ENST00000450868 751 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 RPL35AP19-201ENST00000469425 329 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 SIAH1P1-201ENST00000479411 923 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 NRBF2P4-201ENST00000520874 850 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 IGKV2-18-201ENST00000522607 343 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AC027026.1-201ENST00000532323 742 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AL359513.1-201ENST00000614364 557 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 AC007204.2-201ENST00000615022 616 ntBASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLIP2Q9UDT6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 RN7SKP162-201ENST00000363605 345 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 Z68694.1-201ENST00000413929 841 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 CRIP1P1-201ENST00000427567 185 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 MTND2P40-201ENST00000436718 841 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AC090602.1-201ENST00000469695 252 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AC108693.1-201ENST00000496068 432 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 RPS26P24-201ENST00000497656 331 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms