Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 TRBV8-1-201ENST00000481590 279 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 COX6B1P2-201ENST00000489624 230 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RNU6-491P-201ENST00000516099 110 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC011497.2-201ENST00000600255 639 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC141002.1-201ENST00000607025 279 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC097065.2-201ENST00000608159 533 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC140725.3-201ENST00000616193 880 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC004801.6-201ENST00000616571 978 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC073342.3-201ENST00000624211 193 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC116667.2-201ENST00000641075 823 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RBMY1HP-201ENST00000382759 1389 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC096921.2-201ENST00000561507 1916 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC106754.1-201ENST00000562632 1513 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 MIR130B-202ENST00000385018 82 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 SNORA77.2-201ENST00000408571 112 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC245096.1-201ENST00000413104 546 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 BMS1P13-201ENST00000417301 885 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 MTND4P24-201ENST00000424002 397 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 BRWD1P3-201ENST00000428816 390 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC007000.2-201ENST00000442564 487 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 CFL1P4-201ENST00000451536 498 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC104109.1-201ENST00000498563 436 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AL158068.1-201ENST00000506116 616 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 SNORA76.2-201ENST00000517095 137 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 YWHAZP1-201ENST00000556286 722 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC073333.2-201ENST00000603589 769 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC009948.4-201ENST00000604692 675 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC024884.1-201ENST00000620583 399 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC026124.2-201ENST00000621847 656 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC073488.3-201ENST00000631611 778 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC003992.1-201ENST00000635364 557 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AC011504.1-201ENST00000623331 4103 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 AL645568.2-201ENST00000432815 1337 ntBASIC6.17□□□□□ -1.42
DKK3Q9UBP4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
DKK3Q9UBP4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 CASC19-238ENST00000641523 1558 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 RNU105B-201ENST00000364478 208 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC004386.1-201ENST00000393214 761 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AL132875.1-201ENST00000403623 949 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 VN1R51P-201ENST00000411675 945 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MTND4LP21-201ENST00000415303 295 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC009506.2-201ENST00000420635 840 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms