Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 MRPS21P2-201ENST00000424704 264 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 MED28P3-201ENST00000444288 531 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 OR52A4P-201ENST00000472867 958 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC079080.1-201ENST00000479841 822 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC091167.1-201ENST00000492017 396 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC109464.1-201ENST00000511091 819 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 OR5M2P-201ENST00000529003 936 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC067852.5-201ENST00000589299 310 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AL161637.1-201ENST00000622380 412 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 RPL12P28-201ENST00000430852 489 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AP003400.3-201ENST00000624904 346 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 SPATA31D5P-201ENST00000376459 4784 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 RPS3AP23-201ENST00000401762 784 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 RNU4-25P-201ENST00000410569 230 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 RPL23AP1-201ENST00000428990 471 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC013356.1-201ENST00000489027 564 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC138701.1-201ENST00000524329 714 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC009643.1-201ENST00000532030 391 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC068831.4-201ENST00000556118 109 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC008814.1-201ENST00000603797 406 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 NIP7P2-201ENST00000485801 544 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 PMS2P3-207ENST00000529061 717 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AP001880.2-201ENST00000538233 448 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHD7Q9P2D1 KARSP3-201ENST00000571212 1504 ntBASIC5.48□□□□□ -1.53
CHD7Q9P2D1 OR4F13P-202ENST00000560066 2054 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 CCT8P1-201ENST00000413611 1657 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AC023141.6-201ENST00000429418 337 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 USP24P1-201ENST00000433802 779 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 CT45A11P-201ENST00000448043 1134 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 MALAT1-202ENST00000534336 8708 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 RNA5SP191-201ENST00000362585 102 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 RPL23AP17-201ENST00000401064 499 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 RPEP3-201ENST00000425462 676 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 CENPIP1-201ENST00000425713 902 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AC092754.1-201ENST00000472975 479 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 TVP23CP2-201ENST00000571473 623 ntBASIC5.47□□□□□ -1.53
CHD7Q9P2D1 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHD7Q9P2D1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms