Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 MIR193BHG-214ENST00000641765 509 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC079776.5-201ENST00000641920 211 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AL355488.2-201ENST00000609909 2850 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC097634.1-201ENST00000604491 2467 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 MIR133B-201ENST00000362210 119 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 RN7SKP28-201ENST00000364770 305 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AL121776.1-201ENST00000429337 372 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 MTND2P40-201ENST00000436718 841 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC073072.2-201ENST00000447425 348 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 PPP1R11P1-201ENST00000486095 376 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC093270.2-201ENST00000486157 792 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 AC069542.2-201ENST00000624816 216 ntBASIC5.29□□□□□ -1.56
CCDC88CQ9P219 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC88CQ9P219 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC006206.1-201ENST00000544842 3387 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 RNA5SP183-201ENST00000362452 119 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 OR6D1P-201ENST00000436165 939 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AL606490.1-201ENST00000452266 765 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 LDHBP2-201ENST00000456969 1005 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC128716.1-201ENST00000475129 166 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC021106.1-201ENST00000509020 1058 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 OR4A42P-201ENST00000531397 938 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC078878.1-201ENST00000539832 958 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC004825.1-201ENST00000555068 586 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 HIRAP1-201ENST00000605318 787 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AL445222.1-201ENST00000607259 628 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC005618.4-201ENST00000625053 554 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 RARSP1-201ENST00000542842 1418 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 OR4F13P-202ENST00000560066 2054 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 RNA5SP514-201ENST00000363717 111 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 BX510359.5-201ENST00000515651 304 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 BX323046.1-201ENST00000610145 535 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 MIR8080-201ENST00000622224 89 ntBASIC5.28□□□□□ -1.56
CCDC88CQ9P219 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC88CQ9P219 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AL162456.1-201ENST00000634535 2006 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms