Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF965P-201ENST00000432501 817 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 BUD31P2-201ENST00000449374 300 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 CABYRP1-201ENST00000465493 1045 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR9N1P-202ENST00000494289 481 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC010468.3-201ENST00000508225 458 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 FABP5P6-201ENST00000510588 409 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 MTATP6P9-201ENST00000515039 680 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC007346.2-201ENST00000564816 892 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 BNIP3P31-201ENST00000604515 566 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC135178.6-201ENST00000605314 398 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC018690.1-201ENST00000608144 626 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC008115.3-201ENST00000614874 549 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC016957.2-201ENST00000616998 848 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC079298.2-201ENST00000623885 459 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AL691477.1-201ENST00000624398 162 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 AC010168.2-201ENST00000562691 5428 ntBASIC6.54□□□□□ -1.36
COL20A1Q9P218 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL20A1Q9P218 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL20A1Q9P218 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 MTND4P9-201ENST00000507819 1346 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 RARSP1-201ENST00000542842 1418 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 RN7SKP124-201ENST00000364730 341 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 RNU6-40P-201ENST00000384254 107 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 MIR143-201ENST00000385300 106 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 RMRPP5-201ENST00000411156 267 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AL354692.1-201ENST00000423044 315 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC096775.1-201ENST00000437724 448 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC006326.1-201ENST00000445465 787 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC009963.4-201ENST00000448535 339 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 RN7SL570P-201ENST00000484405 292 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 UBA52P7-201ENST00000486088 380 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 EIF3LP3-201ENST00000495197 822 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC015864.1-201ENST00000496512 544 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC093763.2-201ENST00000505334 1223 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC105384.2-201ENST00000508433 640 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC113192.3-201ENST00000529152 742 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 IGBP1P1-201ENST00000554337 1009 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AL049872.1-201ENST00000556323 322 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 DPPA3P2-202ENST00000557188 1219 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC092868.3-201ENST00000560515 784 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 AP006248.3-201ENST00000623580 594 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AC010872.1-201ENST00000624225 675 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL20A1Q9P218 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 Z83820.1-201ENST00000456978 1499 ntBASIC6.53□□□□□ -1.36
COL20A1Q9P218 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL20A1Q9P218 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL20A1Q9P218 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.52□□□□□ -1.37
COL20A1Q9P218 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms