Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP001120.4-201ENST00000590231 108 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AL355802.3-201ENST00000607571 545 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 SNORD91A-202ENST00000609620 191 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 SLC20A1P2-201ENST00000618036 966 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AL139089.1-201ENST00000620372 975 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 UGT2B26P-201ENST00000508672 1613 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC107021.2-201ENST00000567714 2095 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 AC073055.1-201ENST00000456901 1621 ntBASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 MAPK10-377ENST00000642006 2752 ntBASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.46□□□□□ -1.21
CUEDC1Q9NWM3 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 OR9K2-201ENST00000305377 1122 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-501P-201ENST00000364072 100 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 SNORA4.1-201ENST00000364263 144 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 SNORA51.2-201ENST00000364595 132 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.302-201ENST00000364997 102 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 CALM2P3-201ENST00000400429 449 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AL590143.1-201ENST00000405071 138 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-248P-201ENST00000410720 107 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC004987.3-201ENST00000413879 771 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC019050.1-201ENST00000418508 492 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 VN1R20P-201ENST00000425215 966 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 MTCO1P20-201ENST00000425366 358 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 RPL23AP4-201ENST00000427757 463 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AL606752.1-201ENST00000435442 666 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC231532.1-201ENST00000438584 312 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 IPO7P1-201ENST00000442031 636 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC002553.1-201ENST00000442828 802 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC239367.2-201ENST00000447309 705 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 RPL39P6-201ENST00000448289 150 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC114300.1-201ENST00000502347 280 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC233724.1-201ENST00000503894 233 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC112225.1-201ENST00000508230 297 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC114801.1-201ENST00000512633 297 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 RN7SKP2-201ENST00000517003 319 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC005832.3-201ENST00000537929 631 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AK6P1-201ENST00000540219 478 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC023080.1-201ENST00000551663 931 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 DPPA3P2-201ENST00000553589 478 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AL355076.3-201ENST00000555838 587 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC006504.6-201ENST00000590142 199 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AP001429.1-201ENST00000602568 530 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AL109918.2-201ENST00000605188 279 ntBASIC7.46□□□□□ -1.22
CUEDC1Q9NWM3 AC005962.2-201ENST00000611427 652 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms