Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AL137074.1-201ENST00000442640 465 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AL356498.1-201ENST00000443334 334 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AL157392.2-201ENST00000449462 474 ntTSL 3 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 HSFX4-201ENST00000457775 1184 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 snoU13.8-201ENST00000458890 104 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RPL38P1-201ENST00000460914 211 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RN7SL761P-201ENST00000463259 278 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RN7SL586P-201ENST00000479137 296 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC012123.2-201ENST00000485809 248 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC073861.1-201ENST00000496294 459 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 NMNAT1P4-201ENST00000505598 840 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RN7SKP242-201ENST00000515967 289 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AP003181.2-201ENST00000528941 181 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 CBX3P5-201ENST00000552017 521 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 DPPA5P1-201ENST00000600430 340 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 CDK2AP2P1-201ENST00000617479 328 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RFPL3-AS1_1.2-201ENST00000618747 88 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 MIR6511B2-201ENST00000636908 71 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC007529.1-201ENST00000418574 2178 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 SSXP3-201ENST00000442971 1300 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 HVCN1-207ENST00000548312 1301 ntTSL 2 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AL117339.4-201ENST00000608335 7063 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.71□□□□□ -0.85
RTN4Q9NQC3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 MIR503-201ENST00000385270 71 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 RPSAP10-201ENST00000426103 878 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 HLA-T-206ENST00000429813 450 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC104073.1-201ENST00000451988 151 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 TRBV21-1-201ENST00000453262 348 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 RN7SL507P-201ENST00000474076 296 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 NPM1P41-201ENST00000512920 831 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AARSP1-201ENST00000514795 453 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 Y_RNA.704-201ENST00000516851 102 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 RNA5SP159-201ENST00000517161 103 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AF235103.2-201ENST00000525753 346 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AL132777.1-201ENST00000556153 618 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 DYNLL1P3-201ENST00000596113 266 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC104237.3-201ENST00000611809 427 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 U1.25-201ENST00000614085 162 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC010087.1-201ENST00000618630 438 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC010332.1-201ENST00000620439 97 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AC009318.4-201ENST00000620496 486 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 SEM1-223ENST00000623498 582 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 AP001767.4-201ENST00000624584 452 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms