Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC009135.2-201ENST00000624136 1768 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 RN7SKP118-201ENST00000364331 330 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 OR4F7P-201ENST00000402444 931 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 RPSAP42-201ENST00000403415 878 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 OR4F1P-201ENST00000405102 938 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 ATP5BP1-201ENST00000411980 1574 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 VN2R3P-201ENST00000422626 1412 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 OR4F2P-201ENST00000424047 938 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 CHCHD3P1-201ENST00000425516 676 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC009299.1-201ENST00000429684 717 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 ARMC8P1-201ENST00000443069 1289 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AL591379.2-201ENST00000450223 397 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 RN7SL58P-201ENST00000473445 294 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC037198.2-201ENST00000478845 733 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 ST13P12-201ENST00000508958 1094 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 RNU6-528P-201ENST00000516926 100 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 IGLV3-6-201ENST00000523937 250 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 COX6CP11-201ENST00000555293 229 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 TPRKBP2-201ENST00000565969 475 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 MIR3912-201ENST00000577566 105 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC068790.7-201ENST00000602347 528 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AP001267.4-201ENST00000602598 545 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AL078623.1-201ENST00000602702 907 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC009237.13-201ENST00000603193 276 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC010857.1-201ENST00000606398 594 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC011374.2-201ENST00000607135 526 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 uc_338.37-201ENST00000620113 186 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC022509.4-201ENST00000621404 572 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC004836.1-201ENST00000623032 634 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AL353608.4-201ENST00000624487 1188 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.8□□□□□ -1.32
SSU72Q9NP77 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSU72Q9NP77 AP005901.5-201ENST00000545779 1796 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 AC006511.3-201ENST00000624929 1783 ntBASIC6.8□□□□□ -1.32
SSU72Q9NP77 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 OLMALINC-203ENST00000641087 3779 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms