Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 SELENOWP1-201ENST00000322792 252 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 MT-TP-201ENST00000387461 68 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 RN7SKP279-201ENST00000411383 298 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 RPA2P2-201ENST00000419698 796 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 CRIP1P1-201ENST00000427567 185 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 FTLP19-201ENST00000433300 394 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC023512.1-201ENST00000444513 499 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC005077.1-201ENST00000449226 375 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 RNU1-88P-201ENST00000459274 128 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 RN7SL269P-201ENST00000467795 305 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC021205.1-201ENST00000468797 348 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC018797.1-201ENST00000510791 255 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC026782.2-201ENST00000510845 636 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC103833.1-201ENST00000517442 172 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AP005119.1-201ENST00000580956 292 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC090236.2-201ENST00000587933 1101 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL133481.2-203ENST00000607558 139 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL139099.4-201ENST00000614802 114 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC004801.6-201ENST00000616571 978 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AL645927.2-201ENST00000618350 349 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC021766.1-201ENST00000624404 741 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 AC097372.4-201ENST00000625025 466 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 CASC19-274ENST00000642018 970 ntBASIC5.65□□□□□ -1.5
BRF2Q9HAW0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BRF2Q9HAW0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 VPS35P1-201ENST00000563400 1518 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 RNA5SP279-201ENST00000365513 117 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 SNORA51.9-201ENST00000384295 124 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 GCNT1P4-201ENST00000404096 329 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 METTL15P3-201ENST00000415522 1221 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.64□□□□□ -1.51
BRF2Q9HAW0 AC019205.1-201ENST00000421830 730 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 REREP1Y-201ENST00000422655 198 ntBASIC5.64□□□□□ -1.51
BRF2Q9HAW0 AL121882.1-201ENST00000422893 417 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms