Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SEC61A2Q9H9S3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SEC61A2Q9H9S3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.96□□□□□ -1.45
SEC61A2Q9H9S3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SEC61A2Q9H9S3 AC111188.2-201ENST00000529697 1387 ntBASIC5.96□□□□□ -1.45
SEC61A2Q9H9S3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.96□□□□□ -1.45
SEC61A2Q9H9S3 ZNF806-201ENST00000438300 1774 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC062029.1-202ENST00000606164 3651 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 OR10AB1P-202ENST00000641219 1686 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-553P-201ENST00000364047 96 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 RNU4-51P-201ENST00000364206 140 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 RNU1-55P-201ENST00000365510 158 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 RNA5SP474-201ENST00000391234 90 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC006509.1-201ENST00000420788 634 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 COX7BP2-201ENST00000437976 242 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 E2F6P3-201ENST00000441743 743 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 CASP3P1-201ENST00000446037 609 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 MRPL35P2-201ENST00000448009 511 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AURKAPS1-201ENST00000451805 1212 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC097262.1-201ENST00000452559 548 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 RN7SL372P-201ENST00000461982 298 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC105918.1-201ENST00000474399 838 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 SUMO1P1-201ENST00000497904 306 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC140063.1-201ENST00000541343 259 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 MIR3915-201ENST00000578518 97 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AL590032.1-201ENST00000604920 252 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AL513477.2-201ENST00000607858 568 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 OR1N1-202ENST00000619659 939 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC106782.7-201ENST00000624024 418 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC133555.5-201ENST00000624430 418 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 SNORA16A-202ENST00000628458 135 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC027559.1-201ENST00000636288 271 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 AC018765.1-201ENST00000623357 3446 ntBASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.96□□□□□ -1.46
SEC61A2Q9H9S3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 OR4G1P-202ENST00000641173 1788 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 TNPO1P2-201ENST00000426249 2665 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 API5P1-201ENST00000424316 1510 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL132640.2-201ENST00000559968 1698 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 ANKRD36P1-201ENST00000344424 659 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 Y_RNA.3-201ENST00000362331 103 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-236P-201ENST00000363886 106 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RN7SKP130-201ENST00000364924 301 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-867P-201ENST00000364956 107 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL356317.1-201ENST00000396110 1436 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL133268.1-201ENST00000405676 1401 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 OR6C64P-201ENST00000419708 825 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 TNPO1P1-201ENST00000423641 1138 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms