Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 SNRPGP18-201ENST00000553000 214 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 MIR5008-201ENST00000584300 94 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 HMGB1P24-202ENST00000615653 685 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC112255.1-201ENST00000624070 2493 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 SNORA58.1-201ENST00000364133 136 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 MIR146B-201ENST00000365699 73 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 RNU4-70P-201ENST00000384579 139 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 RNU6-308P-201ENST00000390957 107 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 RNY4P36-201ENST00000391116 96 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 RNU2-9P-201ENST00000410194 145 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 RNU4-61P-201ENST00000411243 107 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC114482.1-201ENST00000418010 247 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 RPL34P3-201ENST00000421454 338 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 DUTP6-201ENST00000425573 462 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AL122003.1-201ENST00000435206 784 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC114755.4-201ENST00000439114 443 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC092634.4-203ENST00000451395 448 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC015724.1-201ENST00000478577 156 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 RN7SL434P-201ENST00000495872 271 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC044787.1-201ENST00000497325 792 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 RFPL4AP3-201ENST00000515267 345 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 OR8A2P-201ENST00000528631 952 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 HMGB1P6-201ENST00000569046 646 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 POLR3GP2-201ENST00000588366 668 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 Z84480.1-201ENST00000605131 311 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC026468.1-201ENST00000614981 107 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC009318.4-201ENST00000620496 486 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 MIR3191-201ENST00000636300 76 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 AC007614.2-201ENST00000569877 1851 ntBASIC7.51□□□□□ -1.21
USB1Q9BQ65 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 MR1-205ENST00000434571 7479 ntTSL 5 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
USB1Q9BQ65 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC7.51□□□□□ -1.21
USB1Q9BQ65 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms