Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SSX3Q99909 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC012254.3-201ENST00000591183 2117 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX3Q99909 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSX3Q99909 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX3Q99909 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 RN7SKP69-201ENST00000365390 305 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AL358178.1-201ENST00000407698 397 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RN7SKP108-201ENST00000411367 328 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 UBE2V1P14-201ENST00000415815 558 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC007562.1-201ENST00000421819 517 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RPS7P14-201ENST00000426405 583 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC110602.1-201ENST00000437414 318 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RPL5P25-201ENST00000441148 775 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC023274.2-201ENST00000445264 521 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC103563.5-201ENST00000455643 364 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RANP2-201ENST00000456833 229 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC098847.1-201ENST00000473094 348 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RPL12P24-201ENST00000474907 486 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RPL34P33-201ENST00000486062 334 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.03□□□□□ -1.6
SSX3Q99909 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.03□□□□□ -1.6
SSX3Q99909 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 NPM1P42-201ENST00000560329 862 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 NDUFA5P11-201ENST00000567995 343 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AC007346.1-201ENST00000569208 867 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC006924.1-201ENST00000610750 559 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AL080312.2-201ENST00000613001 630 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RN7SL261P-201ENST00000613441 282 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 RFPL4AP6-201ENST00000616792 846 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AP001005.3-201ENST00000622049 129 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 AP003499.2-201ENST00000624100 483 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.03□□□□□ -1.6
SSX3Q99909 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SSX3Q99909 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 AC093225.1-201ENST00000506867 1408 ntBASIC5.03□□□□□ -1.6
SSX3Q99909 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SSX3Q99909 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSX3Q99909 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SSX3Q99909 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 AC009962.1-201ENST00000567327 3813 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SSX3Q99909 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 AC138907.8-201ENST00000623981 2256 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 COX6B1P3-201ENST00000312310 260 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
SSX3Q99909 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSX3Q99909 RNU1-49P-201ENST00000363468 159 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 RNU6-1251P-201ENST00000364502 107 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSX3Q99909 SNORA77.2-201ENST00000408571 112 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 MIR1282-201ENST00000408865 101 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 RN7SKP240-201ENST00000410583 375 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX3Q99909 AL158827.1-201ENST00000416300 391 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX3Q99909 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 NPM1P26-201ENST00000426339 738 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 KCTD9P1-201ENST00000430462 1167 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 BX276092.6-201ENST00000430476 250 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 NPM1P18-201ENST00000434232 732 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 MTND2P2-201ENST00000434633 945 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC093716.1-201ENST00000435923 377 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 OR3D1P-201ENST00000438288 955 ntBASIC5.02□□□□□ -1.61
SSX3Q99909 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX3Q99909 BUD31P2-201ENST00000449374 300 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 391.8 ms