Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 KYNUP3-201ENST00000574386 1341 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 RNU1-136P-201ENST00000384181 164 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AC092642.1-201ENST00000392417 425 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 GAPDHP42-201ENST00000406848 981 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 RN7SKP206-201ENST00000410823 293 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 METTL15P3-201ENST00000415522 1221 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AC013410.1-201ENST00000436223 1232 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 LDHBP2-201ENST00000456969 1005 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AC135999.1-201ENST00000478962 479 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 DDX18P6-201ENST00000450119 1997 ntBASIC5.8□□□□□ -1.48
RPRD1AQ96P16 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPRD1AQ96P16 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AC096921.1-201ENST00000411661 375 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AL590399.2-201ENST00000427536 309 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RPL5P2-201ENST00000429598 854 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AC242426.1-201ENST00000435270 960 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RPSAP41-201ENST00000439695 860 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RN7SL466P-201ENST00000497546 295 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 ST13P12-201ENST00000508958 1094 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 NRBF2P4-201ENST00000520874 850 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 PPATP2-201ENST00000605635 508 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 MIR6862-1-201ENST00000613016 70 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 MIR6862-2-201ENST00000614755 70 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AL355480.1-201ENST00000629041 99 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 AL360270.2-201ENST00000562952 5985 ntBASIC5.79□□□□□ -1.48
RPRD1AQ96P16 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RPRD1AQ96P16 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RPRD1AQ96P16 GAPDHP24-201ENST00000328713 983 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms