Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC009963.4-201ENST00000448535 339 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 OR2AF1P-201ENST00000454899 889 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 SNRPCP3-201ENST00000474888 476 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 GOLGA5P1-201ENST00000507317 980 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 OR5AM1P-201ENST00000532136 1032 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC007204.2-201ENST00000615022 616 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC015799.1-201ENST00000622996 3122 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 MSL3P1-202ENST00000440028 1468 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 CASC19-248ENST00000641674 1356 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 RN7SKP160-201ENST00000363804 340 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 MIR323B-201ENST00000385269 82 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 NPM1P37-201ENST00000403105 874 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 UBE2V2P4-201ENST00000447495 259 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AZGP1P2-201ENST00000454506 345 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC100832.1-201ENST00000471945 383 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 RN7SL184P-201ENST00000488308 297 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC090638.1-201ENST00000498296 909 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 ASNSP4-201ENST00000511103 447 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 ATP5LP3-201ENST00000514223 304 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC084824.2-201ENST00000548906 345 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC009237.13-201ENST00000603193 276 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AL353729.2-201ENST00000605859 1249 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC093388.1-201ENST00000609166 430 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 MIR8080-201ENST00000622224 89 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.56□□□□□ -1.52
ECHDC3Q96DC8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC239868.2-201ENST00000564237 4527 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC018809.2-201ENST00000602436 3823 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 RNA5SP319-201ENST00000362768 119 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC090589.1-201ENST00000473109 362 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC108693.1-201ENST00000496068 432 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC090058.1-201ENST00000498788 435 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 IGKV2-18-201ENST00000522607 343 ntBASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.55□□□□□ -1.52
ECHDC3Q96DC8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms