Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC108729.2-201ENST00000476543 840 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 CAB39P1-201ENST00000502277 460 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 snoU109.5-201ENST00000516231 132 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC113192.3-201ENST00000529152 742 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 NANOGNBP2-201ENST00000544753 553 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC015911.5-201ENST00000587076 451 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC006115.2-201ENST00000596823 202 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC135178.6-201ENST00000605314 398 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL096712.1-201ENST00000614561 159 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC015722.2-201ENST00000622210 551 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL121768.1-201ENST00000613917 2544 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RN7SKP128-201ENST00000364270 303 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC017078.1-201ENST00000416146 368 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RPS29P14-201ENST00000431518 171 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC007563.3-201ENST00000433233 371 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 ELOCP3-201ENST00000439303 348 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 DNAJC19P5-201ENST00000443295 316 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL512593.1-201ENST00000444758 779 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL157884.3-201ENST00000448273 1184 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 TRBV5-2-201ENST00000489095 273 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RPL23AP73-201ENST00000492507 471 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC093763.2-201ENST00000505334 1223 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RPL12P48-201ENST00000605620 304 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL645933.2-201ENST00000606743 1207 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC108673.3-201ENST00000609183 335 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL021918.2-201ENST00000613415 194 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 MIR6729-201ENST00000618194 65 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 RMST_5.1-201ENST00000618704 126 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AC027279.4-201ENST00000624371 2072 ntBASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.12□□□□□ -1.27
CHMP4CQ96CF2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC005725.1-201ENST00000577346 2607 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 RNU6-609P-201ENST00000365459 107 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 HSFY1P1-201ENST00000423928 1178 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 MTCO1P31-201ENST00000506355 492 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms