Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC025470.1-201ENST00000510053 2032 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 CFL1P1-202ENST00000432948 411 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 LRRC37A14P-201ENST00000452297 462 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC092905.1-201ENST00000467527 949 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC093763.2-201ENST00000505334 1223 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 DUTP7-201ENST00000507982 486 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 HMGB1P42-201ENST00000532126 553 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AGGF1P7-201ENST00000562369 913 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC104785.1-201ENST00000603220 588 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 RN7SKP185-201ENST00000362813 326 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 RN7SKP17-201ENST00000411242 351 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AK3P5-201ENST00000432033 519 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 SPRYD7P1-201ENST00000443861 570 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC083899.1-201ENST00000454465 3819 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 RPSAP50-201ENST00000481955 852 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 RN7SL97P-201ENST00000486780 299 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC138866.2-201ENST00000508650 584 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 RN7SL708P-201ENST00000580952 299 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC025857.2-201ENST00000602711 238 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC108738.1-201ENST00000603703 237 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AC079097.1-201ENST00000512187 1399 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 AL669831.5-218ENST00000591702 1873 ntBASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM3Q8TF72 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC093267.1-201ENST00000489176 961 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 OR11H3P-201ENST00000554547 982 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AL512329.2-201ENST00000607350 548 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC135068.5-201ENST00000624197 983 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC069542.2-201ENST00000624816 216 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC003973.3-201ENST00000624863 2822 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 MIR133B-201ENST00000362210 119 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC021876.1-201ENST00000425959 359 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 RPL12P3-201ENST00000440080 396 ntBASIC5.67□□□□□ -1.5
SHROOM3Q8TF72 AC023271.1-201ENST00000445936 1090 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms