Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC015864.1-201ENST00000496512 544 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 IGKV1D-22-201ENST00000518953 324 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC020937.1-201ENST00000519677 1013 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC092868.3-201ENST00000560515 784 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC025016.1-201ENST00000616746 682 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AL357562.1-201ENST00000624911 609 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 TMEM30CP-203ENST00000637814 1035 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 OR10AB1P-202ENST00000641219 1686 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AC127070.3-201ENST00000503695 3263 ntBASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SMC1BQ8NDV3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 RNU1-46P-201ENST00000384425 164 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 MIR765-201ENST00000390226 114 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 RNU6-584P-201ENST00000410350 95 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 SLC35E1P1-201ENST00000419313 864 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 MTCO2P1-201ENST00000424648 477 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC091390.2-201ENST00000432573 374 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 CEACAMP9-201ENST00000442990 513 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 OR7E116P-201ENST00000448529 957 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AURKAPS1-201ENST00000451805 1212 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC104629.2-201ENST00000468627 598 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC100832.1-201ENST00000471945 383 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 TRAV31-201ENST00000502780 342 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 OR8G3P-201ENST00000533406 921 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC133644.2-201ENST00000608142 540 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 MIR8080-201ENST00000622224 89 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC004808.1-201ENST00000627671 721 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 SNX18P3-202ENST00000565670 1750 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AC139426.3-201ENST00000605648 2059 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 AP000547.3-204ENST00000588548 2523 ntBASIC7.23□□□□□ -1.25
SMC1BQ8NDV3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC025809.2-201ENST00000625085 1802 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 MIR122-201ENST00000385044 85 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 AC114973.1-201ENST00000429057 632 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 RPS26P4-201ENST00000431743 355 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 PTP4A1P3-201ENST00000433661 420 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 Z80107.1-201ENST00000436830 412 ntBASIC7.22□□□□□ -1.25
SMC1BQ8NDV3 RAB9AP5-201ENST00000437794 597 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms