Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 OR4A17P-201ENST00000526032 904 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC027243.2-201ENST00000602530 724 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC006363.1-201ENST00000603806 463 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC025574.2-201ENST00000615621 514 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 MAPK10-338ENST00000641647 3362 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 YES1P1-201ENST00000418510 1628 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC114786.1-201ENST00000512892 1415 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 RNA5SP510-201ENST00000364697 99 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 U3.28-201ENST00000391249 210 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 GAPDHP42-201ENST00000406848 981 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 RPL7P56-201ENST00000429441 717 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 KCTD9P1-201ENST00000430462 1167 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 BX276092.6-201ENST00000430476 250 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 Z84478.1-201ENST00000438230 1219 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 RPS10P18-201ENST00000442662 495 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AP000547.1-201ENST00000454360 617 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 BX276092.8-201ENST00000455722 250 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 SNORD46.2-201ENST00000516021 102 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 AL139124.1-201ENST00000609123 421 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 CASC19-260ENST00000641828 2001 ntBASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC65Q8IXS2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC018809.2-201ENST00000602436 3823 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 RNA5SP284-201ENST00000384547 118 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 MIR551A-201ENST00000385042 96 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC007161.1-204ENST00000423039 460 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC023271.1-201ENST00000445936 1090 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AZGP1P2-201ENST00000454506 345 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC007998.1-201ENST00000474156 672 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC65Q8IXS2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms