Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR4G1P-202ENST00000641173 1788 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 OR4F13P-202ENST00000560066 2054 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AC104964.3-201ENST00000606115 2860 ntBASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 AC140479.2-201ENST00000421567 3130 ntBASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 AC138907.8-201ENST00000623981 2256 ntBASIC5.15□□□□□ -1.58
C9orf40Q8IXQ3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 RNA5SP234-201ENST00000363916 119 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC092642.1-201ENST00000392417 425 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 GABARAPL3-201ENST00000412799 354 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC117434.1-201ENST00000419971 836 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC007161.1-204ENST00000423039 460 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 MTCO3P17-201ENST00000443775 513 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC092106.1-201ENST00000444291 373 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 DEFB109A-201ENST00000482450 265 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AL136038.1-201ENST00000497246 351 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 RN7SL284P-201ENST00000498823 275 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC122688.1-201ENST00000541494 223 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 MIR6729-201ENST00000618194 65 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC132068.1-201ENST00000623805 459 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AL049767.1-202ENST00000637826 242 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 AC132825.8-201ENST00000640783 297 ntBASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
C9orf40Q8IXQ3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AP002512.4-202ENST00000641599 4530 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC144833.1-201ENST00000567953 4089 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 RNU4-2-201ENST00000365668 141 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 MIR551A-201ENST00000385042 96 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 RPSAP35-201ENST00000413753 818 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AL121776.1-201ENST00000429337 372 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC073072.2-201ENST00000447425 348 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 RANP1-206ENST00000455094 651 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 SEPT14P1-201ENST00000458703 648 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 SNORD125-201ENST00000459538 96 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 RPL35AP19-201ENST00000469425 329 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC015720.2-201ENST00000567709 334 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AP005901.4-201ENST00000577336 569 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC018809.2-201ENST00000602436 3823 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC002069.2-201ENST00000603580 883 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms