Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RPL24P4-201ENST00000326586 421 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 ANKRD36P1-201ENST00000344424 659 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RNU4-51P-201ENST00000364206 140 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RNU4-4P-201ENST00000364588 130 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 MRPS6P2-201ENST00000381143 370 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 PRELID1P1-201ENST00000403549 660 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL590084.1-201ENST00000407885 387 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL359092.1-201ENST00000417156 265 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RPF2P1-201ENST00000424137 906 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 MTCO3P30-201ENST00000426425 670 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL138878.2-201ENST00000440581 1241 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SEPT14P24-201ENST00000447236 180 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 MRPL35P4-201ENST00000453682 566 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 USP9YP10-201ENST00000454868 628 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC019084.1-201ENST00000457337 432 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 CST12P-201ENST00000457644 362 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RPS27P20-201ENST00000492051 246 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC023050.1-201ENST00000498198 304 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 USP9YP5-201ENST00000511770 630 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RNA5SP116-201ENST00000516132 98 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC116917.1-201ENST00000520558 305 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 OR5AM1P-201ENST00000532136 1032 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC135628.1-201ENST00000568867 534 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 DPRXP4-201ENST00000578053 568 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL356986.1-201ENST00000604085 341 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC011891.2-201ENST00000604949 397 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC025175.1-201ENST00000606482 759 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AC010608.2-201ENST00000624830 470 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AL133268.1-201ENST00000405676 1401 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 Z83820.1-201ENST00000456978 1499 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 CR382285.2-201ENST00000624662 1495 ntBASIC6.41□□□□□ -1.38
TRIM48Q8IWZ4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 MAPK10-344ENST00000641718 3746 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 ASNSP6-201ENST00000592770 1618 ntBASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM48Q8IWZ4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms