Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC114786.1-201ENST00000512892 1415 ntBASIC5□□□□□ -1.61
H3F3AP84243 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5□□□□□ -1.61
H3F3AP84243 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5□□□□□ -1.61
H3F3AP84243 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5□□□□□ -1.61
H3F3AP84243 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5□□□□□ -1.61
H3F3AP84243 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5□□□□□ -1.61
H3F3AP84243 AL161636.2-201ENST00000445179 927 ntBASIC5□□□□□ -1.61
H3F3AP84243 RPL36AP39-201ENST00000445859 318 ntBASIC5□□□□□ -1.61
H3F3AP84243 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5□□□□□ -1.61
H3F3AP84243 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5□□□□□ -1.61
H3F3AP84243 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5□□□□□ -1.61
H3F3AP84243 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5□□□□□ -1.61
H3F3AP84243 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5□□□□□ -1.61
H3F3AP84243 MIR4505-201ENST00000582238 73 ntBASIC5□□□□□ -1.61
H3F3AP84243 H3F3BP2-201ENST00000583907 357 ntBASIC5□□□□□ -1.61
H3F3AP84243 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5□□□□□ -1.61
H3F3AP84243 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5□□□□□ -1.61
H3F3AP84243 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5□□□□□ -1.61
H3F3AP84243 AC008115.3-201ENST00000614874 549 ntBASIC5□□□□□ -1.61
H3F3AP84243 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
H3F3AP84243 AC006206.1-201ENST00000544842 3387 ntBASIC5□□□□□ -1.61
H3F3AP84243 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5□□□□□ -1.61
H3F3AP84243 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
H3F3AP84243 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
H3F3AP84243 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 MTND5P12-201ENST00000502851 1449 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
H3F3AP84243 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 RNA5SP187-201ENST00000384400 119 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 RN7SKP293-201ENST00000411389 296 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.99□□□□□ -1.61
H3F3AP84243 AL158827.1-201ENST00000416300 391 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.99□□□□□ -1.61
H3F3AP84243 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AL133173.1-201ENST00000423458 397 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 RIMKLBP2-201ENST00000424737 654 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 RPS27AP6-201ENST00000427962 448 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 GAPDHP34-201ENST00000432112 823 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.99□□□□□ -1.61
H3F3AP84243 AP000281.1-201ENST00000444036 316 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 LINC02210-201ENST00000444561 288 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 EEF1B2P6-201ENST00000445713 673 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
H3F3AP84243 AC073072.2-201ENST00000447425 348 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 AP000547.1-201ENST00000454360 617 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.99□□□□□ -1.61
H3F3AP84243 MTATP6P1-201ENST00000514057 681 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 AL049872.1-201ENST00000556323 322 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.99□□□□□ -1.61
H3F3AP84243 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.99□□□□□ -1.61
H3F3AP84243 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.99□□□□□ -1.61
H3F3AP84243 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 PPATP2-201ENST00000605635 508 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AL353729.2-201ENST00000605859 1249 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 RN7SL787P-201ENST00000613000 284 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC126175.1-201ENST00000617041 758 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AL357153.4-201ENST00000620487 1016 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC005618.4-201ENST00000625053 554 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC103703.1-201ENST00000634783 663 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
H3F3AP84243 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
H3F3AP84243 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
H3F3AP84243 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
H3F3AP84243 AC068870.1-201ENST00000563737 2455 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AL137141.1-201ENST00000624622 4836 ntBASIC4.99□□□□□ -1.61
H3F3AP84243 AC099654.3-201ENST00000447087 1546 ntBASIC4.98□□□□□ -1.61
H3F3AP84243 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms