Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 RPL23AP23-201ENST00000452590 471 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC008410.1-201ENST00000483777 339 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AC021006.1-201ENST00000489849 553 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC091874.2-201ENST00000505889 720 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.83□□□□□ -1.64
CX3CL1P78423 CR383658.1-201ENST00000514609 734 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 RN7SKP183-201ENST00000517169 324 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 MTCYBP19-201ENST00000517463 1124 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AP003102.1-201ENST00000525638 661 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 OR4A17P-201ENST00000526032 904 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC087888.1-201ENST00000550884 1254 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AL512310.9-201ENST00000553311 948 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC021483.2-201ENST00000567415 758 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 OR1E3-201ENST00000575608 948 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 MIR4502-201ENST00000580432 81 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 AL512652.1-201ENST00000619006 500 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CL1P78423 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CL1P78423 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC079298.1-201ENST00000625026 1619 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 CASC19-281ENST00000642118 1554 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC107021.2-201ENST00000567714 2095 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC083899.2-201ENST00000423285 1376 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 RNA5SP110-201ENST00000362638 115 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.82□□□□□ -1.64
CX3CL1P78423 GCNT6-201ENST00000379591 934 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 TAF9BP2-201ENST00000400856 499 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CX3CL1P78423 PTCD2P2-201ENST00000415579 1095 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AC092570.3-201ENST00000420113 693 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CL1P78423 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 RPSAP65-201ENST00000429660 595 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CL1P78423 KRT8P51-201ENST00000438938 274 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 RPL6P30-201ENST00000443382 862 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 RPL5P7-201ENST00000444235 813 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 ZNF619P1-201ENST00000446539 752 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 CALM1P2-201ENST00000452941 448 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 PPIAP7-201ENST00000454070 489 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 OSTCP1-201ENST00000455507 450 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AC090602.1-201ENST00000469695 252 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AC091544.1-201ENST00000484702 348 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 RPL23AP40-201ENST00000487630 390 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AC008945.1-201ENST00000505144 499 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC018797.1-201ENST00000510791 255 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC022826.1-201ENST00000519383 805 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 HAUS1P3-201ENST00000523909 662 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 OR56A7P-201ENST00000524865 941 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AP000620.1-201ENST00000527147 504 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CL1P78423 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CL1P78423 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC007346.1-201ENST00000569208 867 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CL1P78423 CBX3P2-202ENST00000583365 535 ntBASIC4.82□□□□□ -1.64
CX3CL1P78423 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CL1P78423 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CL1P78423 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.82□□□□□ -1.64
CX3CL1P78423 ABI1P1-201ENST00000603375 1120 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms