Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC244502.2-201ENST00000543361 851 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 RN7SL708P-201ENST00000580952 299 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 AC006115.2-201ENST00000596823 202 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 AC132825.8-201ENST00000640783 297 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CCNA1P78396 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCNA1P78396 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCNA1P78396 AC073365.1-203ENST00000641055 1992 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.42□□□□□ -1.38
CCNA1P78396 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCNA1P78396 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.41□□□□□ -1.38
CCNA1P78396 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCNA1P78396 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCNA1P78396 AL645733.1-201ENST00000402250 217 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.41□□□□□ -1.38
CCNA1P78396 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.41□□□□□ -1.38
CCNA1P78396 FAM96AP1-201ENST00000430879 482 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 AL772161.1-201ENST00000439130 476 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.41□□□□□ -1.38
CCNA1P78396 CBX1P5-201ENST00000475330 559 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 RN7SL808P-201ENST00000496066 299 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 RPEP1-201ENST00000504507 658 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.41□□□□□ -1.38
CCNA1P78396 NPM1P21-201ENST00000513394 762 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 EIF4A2P5-201ENST00000529914 499 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.41□□□□□ -1.38
CCNA1P78396 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.41□□□□□ -1.38
CCNA1P78396 BLZF2P-201ENST00000553776 1130 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.41□□□□□ -1.38
CCNA1P78396 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.41□□□□□ -1.38
CCNA1P78396 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.41□□□□□ -1.38
CCNA1P78396 AC025574.2-201ENST00000615621 514 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 PWAR1-201ENST00000624188 2414 ntBASIC6.41□□□□□ -1.38
CCNA1P78396 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCNA1P78396 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CCNA1P78396 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CCNA1P78396 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCNA1P78396 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCNA1P78396 MFSD8-239ENST00000641590 2479 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCNA1P78396 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCNA1P78396 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.4□□□□□ -1.38
CCNA1P78396 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CCNA1P78396 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCNA1P78396 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCNA1P78396 RPL23P2-201ENST00000320371 421 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCNA1P78396 SNORD1C-201ENST00000363315 78 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCNA1P78396 MIR585-201ENST00000384887 94 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 AL360271.1-201ENST00000395679 510 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.4□□□□□ -1.38
CCNA1P78396 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.4□□□□□ -1.38
CCNA1P78396 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.4□□□□□ -1.38
CCNA1P78396 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.4□□□□□ -1.38
CCNA1P78396 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.4□□□□□ -1.38
CCNA1P78396 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CCNA1P78396 AC087763.1-201ENST00000603391 286 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 AC009163.6-201ENST00000612367 342 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 AC090510.2-201ENST00000617465 629 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCNA1P78396 AC074101.1-201ENST00000637861 241 ntBASIC6.4□□□□□ -1.38
CCNA1P78396 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.4□□□□□ -1.38
CCNA1P78396 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCNA1P78396 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCNA1P78396 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.4□□□□□ -1.39
CCNA1P78396 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCNA1P78396 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCNA1P78396 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCNA1P78396 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.4□□□□□ -1.39
CCNA1P78396 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCNA1P78396 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms