Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 RPL21P67-201ENST00000402896 478 ntBASIC6.13□□□□□ -1.43
TPM4P67936 NENFP1-201ENST00000419476 466 ntBASIC6.13□□□□□ -1.43
TPM4P67936 AC017019.1-201ENST00000426129 261 ntBASIC6.13□□□□□ -1.43
TPM4P67936 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TPM4P67936 BX119321.1-201ENST00000428912 797 ntBASIC6.13□□□□□ -1.43
TPM4P67936 GAPDHP59-201ENST00000435908 267 ntBASIC6.13□□□□□ -1.43
TPM4P67936 AC064862.5-201ENST00000440618 334 ntBASIC6.13□□□□□ -1.43
TPM4P67936 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM4P67936 SNRPCP11-201ENST00000492453 205 ntBASIC6.13□□□□□ -1.43
TPM4P67936 IGBP1P4-201ENST00000503202 879 ntBASIC6.13□□□□□ -1.43
TPM4P67936 AC112484.3-201ENST00000505910 329 ntBASIC6.13□□□□□ -1.43
TPM4P67936 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.13□□□□□ -1.43
TPM4P67936 GUSBP9-201ENST00000510138 584 ntBASIC6.13□□□□□ -1.43
TPM4P67936 AC016559.2-201ENST00000510759 359 ntBASIC6.13□□□□□ -1.43
TPM4P67936 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 AC092709.1-201ENST00000521355 1045 ntBASIC6.13□□□□□ -1.43
TPM4P67936 IGLV3-30-201ENST00000524362 298 ntBASIC6.13□□□□□ -1.43
TPM4P67936 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.13□□□□□ -1.43
TPM4P67936 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM4P67936 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TPM4P67936 AC009237.13-201ENST00000603193 276 ntBASIC6.13□□□□□ -1.43
TPM4P67936 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 PCAT14-202ENST00000627127 3935 ntBASIC6.13□□□□□ -1.43
TPM4P67936 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.13□□□□□ -1.43
TPM4P67936 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TPM4P67936 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 AC104260.2-201ENST00000623551 3497 ntBASIC6.12□□□□□ -1.43
TPM4P67936 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TPM4P67936 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.12□□□□□ -1.43
TPM4P67936 RNU1-19P-201ENST00000363306 165 ntBASIC6.12□□□□□ -1.43
TPM4P67936 RN7SKP257-201ENST00000364525 309 ntBASIC6.12□□□□□ -1.43
TPM4P67936 AC007618.1-201ENST00000366455 732 ntBASIC6.12□□□□□ -1.43
TPM4P67936 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TPM4P67936 GCNT1P4-201ENST00000404096 329 ntBASIC6.12□□□□□ -1.43
TPM4P67936 NFU1P1-201ENST00000413128 774 ntBASIC6.12□□□□□ -1.43
TPM4P67936 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 AL139158.1-201ENST00000424719 340 ntBASIC6.12□□□□□ -1.43
TPM4P67936 VN1R110P-201ENST00000438988 971 ntBASIC6.12□□□□□ -1.43
TPM4P67936 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.12□□□□□ -1.43
TPM4P67936 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 AC023194.2-201ENST00000465398 406 ntBASIC6.12□□□□□ -1.43
TPM4P67936 AC022215.1-201ENST00000481770 362 ntBASIC6.12□□□□□ -1.43
TPM4P67936 RPS24P16-201ENST00000497294 392 ntBASIC6.12□□□□□ -1.43
TPM4P67936 MYL12BP2-201ENST00000503948 512 ntBASIC6.12□□□□□ -1.43
TPM4P67936 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 RN7SKP35-201ENST00000517210 151 ntBASIC6.12□□□□□ -1.43
TPM4P67936 TRIM51GP-201ENST00000534741 1350 ntBASIC6.12□□□□□ -1.43
TPM4P67936 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.12□□□□□ -1.43
TPM4P67936 AC006349.1-201ENST00000555526 235 ntBASIC6.12□□□□□ -1.43
TPM4P67936 MTCYBP13-201ENST00000578634 1093 ntBASIC6.12□□□□□ -1.43
TPM4P67936 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TPM4P67936 PRPF19P1-201ENST00000584766 898 ntBASIC6.12□□□□□ -1.43
TPM4P67936 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.12□□□□□ -1.43
TPM4P67936 AC007842.1-201ENST00000597336 2039 ntBASIC6.12□□□□□ -1.43
TPM4P67936 AL390318.1-201ENST00000624564 687 ntBASIC6.12□□□□□ -1.43
TPM4P67936 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 AC073869.8-201ENST00000641806 335 ntBASIC6.12□□□□□ -1.43
TPM4P67936 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
TPM4P67936 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM4P67936 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TPM4P67936 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TPM4P67936 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
TPM4P67936 AL354890.1-201ENST00000413730 346 ntBASIC6.11□□□□□ -1.43
TPM4P67936 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM4P67936 HSPE1P16-201ENST00000426640 348 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AL022331.1-201ENST00000429025 477 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TPM4P67936 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM4P67936 RPL12P49-201ENST00000441100 121 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM4P67936 AC090804.1-201ENST00000448870 490 ntBASIC6.11□□□□□ -1.43
TPM4P67936 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms