Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
SPCS3P61009 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.64□□□□□ -1.67
SPCS3P61009 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.64□□□□□ -1.67
SPCS3P61009 DYNLL1P4-201ENST00000549314 266 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.64□□□□□ -1.67
SPCS3P61009 RN7SL66P-201ENST00000582099 264 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 MIR4701-201ENST00000583094 63 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 AP002884.5-201ENST00000595053 1132 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.64□□□□□ -1.67
SPCS3P61009 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.64□□□□□ -1.67
SPCS3P61009 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.64□□□□□ -1.67
SPCS3P61009 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.64□□□□□ -1.67
SPCS3P61009 MIR6885-201ENST00000612241 66 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.64□□□□□ -1.67
SPCS3P61009 MIR6133-201ENST00000617057 108 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 FAM27E2-201ENST00000619668 403 ntBASIC4.64□□□□□ -1.67
SPCS3P61009 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPCS3P61009 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SPCS3P61009 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPCS3P61009 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPCS3P61009 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SPCS3P61009 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.64□□□□□ -1.67
SPCS3P61009 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SPCS3P61009 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SPCS3P61009 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 RNA5SP110-201ENST00000362638 115 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SPCS3P61009 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 RPS24P12-201ENST00000402084 394 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 AL359643.1-201ENST00000404109 423 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 NFU1P1-201ENST00000413128 774 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 RPL35AP3-201ENST00000414680 288 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.63□□□□□ -1.67
SPCS3P61009 HYALP1-201ENST00000417674 1279 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 RNF10P1-201ENST00000418589 369 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 AL022324.2-201ENST00000434827 780 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 NPM1P39-201ENST00000449818 867 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 CFL1P4-201ENST00000451536 498 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 PPIAP7-201ENST00000454070 489 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.63□□□□□ -1.67
SPCS3P61009 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.63□□□□□ -1.67
SPCS3P61009 RPS23P2-201ENST00000463671 415 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 PSAT1P4-201ENST00000466500 526 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.63□□□□□ -1.67
SPCS3P61009 HMGN1P16-201ENST00000508308 283 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.63□□□□□ -1.67
SPCS3P61009 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 AP000620.1-201ENST00000527147 504 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 AC137627.1-201ENST00000545761 289 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.63□□□□□ -1.67
SPCS3P61009 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.63□□□□□ -1.67
SPCS3P61009 MRPS21P8-201ENST00000569196 235 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.63□□□□□ -1.67
SPCS3P61009 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.63□□□□□ -1.67
SPCS3P61009 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 AC079298.1-201ENST00000625026 1619 ntBASIC4.63□□□□□ -1.67
SPCS3P61009 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SPCS3P61009 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.63□□□□□ -1.67
SPCS3P61009 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SPCS3P61009 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.63□□□□□ -1.67
SPCS3P61009 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 AC007938.2-201ENST00000604666 2634 ntBASIC4.62□□□□□ -1.67
SPCS3P61009 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SPCS3P61009 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.62□□□□□ -1.67
SPCS3P61009 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SPCS3P61009 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SPCS3P61009 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.62□□□□□ -1.67
SPCS3P61009 SNORA70.6-201ENST00000383934 134 ntBASIC4.62□□□□□ -1.67
SPCS3P61009 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SPCS3P61009 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SPCS3P61009 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.62□□□□□ -1.67
SPCS3P61009 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.62□□□□□ -1.67
SPCS3P61009 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.62□□□□□ -1.67
SPCS3P61009 AC092865.3-201ENST00000425390 1026 ntBASIC4.62□□□□□ -1.67
SPCS3P61009 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms