Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH4P55283 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH4P55283 RNA5SP362-201ENST00000516048 118 ntBASIC5.72□□□□□ -1.49
CDH4P55283 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH4P55283 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH4P55283 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 MIR6768-201ENST00000610734 72 ntBASIC5.72□□□□□ -1.49
CDH4P55283 MIR6729-201ENST00000618194 65 ntBASIC5.72□□□□□ -1.49
CDH4P55283 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 CDY11P-201ENST00000447168 1651 ntBASIC5.72□□□□□ -1.49
CDH4P55283 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.72□□□□□ -1.49
CDH4P55283 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDH4P55283 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.71□□□□□ -1.49
CDH4P55283 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDH4P55283 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDH4P55283 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CDH4P55283 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 AC005261.6-201ENST00000623072 1387 ntBASIC5.71□□□□□ -1.5
CDH4P55283 CASC19-248ENST00000641674 1356 ntBASIC5.71□□□□□ -1.5
CDH4P55283 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 NLRP3P1-201ENST00000622303 1785 ntBASIC5.71□□□□□ -1.5
CDH4P55283 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 U3.10-201ENST00000364459 214 ntBASIC5.71□□□□□ -1.5
CDH4P55283 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 U3.25-201ENST00000391209 220 ntBASIC5.71□□□□□ -1.5
CDH4P55283 OR3A2-201ENST00000408891 1076 ntBASIC5.71□□□□□ -1.5
CDH4P55283 AC007161.1-204ENST00000423039 460 ntBASIC5.71□□□□□ -1.5
CDH4P55283 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH4P55283 AC012075.1-201ENST00000436549 580 ntBASIC5.71□□□□□ -1.5
CDH4P55283 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 RPS17P5-201ENST00000498293 408 ntBASIC5.71□□□□□ -1.5
CDH4P55283 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH4P55283 AC084824.2-201ENST00000548906 345 ntBASIC5.71□□□□□ -1.5
CDH4P55283 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH4P55283 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CDH4P55283 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 AC010245.2-201ENST00000606908 1167 ntBASIC5.71□□□□□ -1.5
CDH4P55283 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 AL118522.2-201ENST00000616045 615 ntBASIC5.71□□□□□ -1.5
CDH4P55283 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH4P55283 AC232271.1-201ENST00000602455 2715 ntBASIC5.71□□□□□ -1.5
CDH4P55283 BCORP1-203ENST00000513194 5093 ntBASIC5.71□□□□□ -1.5
CDH4P55283 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 AC123769.1-201ENST00000530992 3192 ntBASIC5.71□□□□□ -1.5
CDH4P55283 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH4P55283 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 AL355834.1-201ENST00000556602 3965 ntBASIC5.71□□□□□ -1.5
CDH4P55283 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CDH4P55283 AC087516.1-201ENST00000561236 2428 ntBASIC5.7□□□□□ -1.5
CDH4P55283 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH4P55283 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH4P55283 RNA5SP319-201ENST00000362768 119 ntBASIC5.7□□□□□ -1.5
CDH4P55283 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH4P55283 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.7□□□□□ -1.5
CDH4P55283 Z93019.1-201ENST00000416450 973 ntBASIC5.7□□□□□ -1.5
CDH4P55283 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH4P55283 AC100832.1-201ENST00000471945 383 ntBASIC5.7□□□□□ -1.5
CDH4P55283 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH4P55283 AC112184.1-201ENST00000505179 312 ntBASIC5.7□□□□□ -1.5
CDH4P55283 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH4P55283 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDH4P55283 AC122688.1-201ENST00000541494 223 ntBASIC5.7□□□□□ -1.5
CDH4P55283 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH4P55283 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH4P55283 AL353729.2-201ENST00000605859 1249 ntBASIC5.7□□□□□ -1.5
CDH4P55283 AC016252.1-201ENST00000609721 474 ntBASIC5.7□□□□□ -1.5
CDH4P55283 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH4P55283 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH4P55283 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
CDH4P55283 AC009962.1-201ENST00000567327 3813 ntBASIC5.7□□□□□ -1.5
CDH4P55283 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH4P55283 AC012078.1-201ENST00000405035 1646 ntBASIC5.7□□□□□ -1.5
CDH4P55283 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
CDH4P55283 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDH4P55283 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDH4P55283 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDH4P55283 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CDH4P55283 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH4P55283 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms