Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC025809.2-201ENST00000625085 1802 ntBASIC7.43□□□□□ -1.22
USP11P51784 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.43□□□□□ -1.22
USP11P51784 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 AP001157.1-201ENST00000550837 2339 ntBASIC7.43□□□□□ -1.22
USP11P51784 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.43□□□□□ -1.22
USP11P51784 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USP11P51784 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 ATP5F1P3-201ENST00000397213 657 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.43□□□□□ -1.22
USP11P51784 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.43□□□□□ -1.22
USP11P51784 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USP11P51784 RPL23AP85-201ENST00000421838 433 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 RBMX2P4-201ENST00000441256 376 ntBASIC7.43□□□□□ -1.22
USP11P51784 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 RPL21P47-201ENST00000483696 477 ntBASIC7.43□□□□□ -1.22
USP11P51784 MTAPP1-201ENST00000489154 819 ntBASIC7.43□□□□□ -1.22
USP11P51784 H3F3AP3-201ENST00000497682 407 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC026414.1-201ENST00000504046 698 ntBASIC7.43□□□□□ -1.22
USP11P51784 SNORA58-201ENST00000505219 137 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC008565.1-201ENST00000509046 885 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC093664.1-201ENST00000511779 289 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 AC138517.1-201ENST00000515724 568 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.43□□□□□ -1.22
USP11P51784 OR8I1P-201ENST00000529291 931 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.43□□□□□ -1.22
USP11P51784 RPL3P13-201ENST00000550415 216 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC244034.2-201ENST00000562504 509 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 AL512347.1-201ENST00000566420 503 ntBASIC7.43□□□□□ -1.22
USP11P51784 MTCO3P24-201ENST00000572729 782 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.43□□□□□ -1.22
USP11P51784 SYPL1P2-201ENST00000582878 727 ntBASIC7.43□□□□□ -1.22
USP11P51784 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 AL136363.2-201ENST00000604173 851 ntBASIC7.43□□□□□ -1.22
USP11P51784 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.43□□□□□ -1.22
USP11P51784 AL589743.6-201ENST00000611025 117 ntBASIC7.43□□□□□ -1.22
USP11P51784 AC024941.1-201ENST00000612250 334 ntBASIC7.43□□□□□ -1.22
USP11P51784 AL138478.1-201ENST00000612252 832 ntBASIC7.43□□□□□ -1.22
USP11P51784 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
USP11P51784 AC010624.4-201ENST00000597606 1351 ntBASIC7.43□□□□□ -1.22
USP11P51784 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USP11P51784 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.43□□□□□ -1.22
USP11P51784 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 SMG1P5-202ENST00000529428 4219 ntBASIC7.42□□□□□ -1.22
USP11P51784 SMG1P2-201ENST00000566127 4221 ntBASIC7.42□□□□□ -1.22
USP11P51784 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 AC023245.2-201ENST00000530760 2978 ntBASIC7.42□□□□□ -1.22
USP11P51784 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.42□□□□□ -1.22
USP11P51784 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 AC005034.3-201ENST00000604845 1747 ntBASIC7.42□□□□□ -1.22
USP11P51784 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.42□□□□□ -1.22
USP11P51784 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 RNA5SP188-201ENST00000362916 129 ntBASIC7.42□□□□□ -1.22
USP11P51784 RNU6-553P-201ENST00000364047 96 ntBASIC7.42□□□□□ -1.22
USP11P51784 Y_RNA.516-201ENST00000384541 124 ntBASIC7.42□□□□□ -1.22
USP11P51784 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 FAM183DP-201ENST00000421987 399 ntBASIC7.42□□□□□ -1.22
USP11P51784 AC021876.1-201ENST00000425959 359 ntBASIC7.42□□□□□ -1.22
USP11P51784 AL022331.1-201ENST00000429025 477 ntBASIC7.42□□□□□ -1.22
USP11P51784 MTCO1P45-201ENST00000431457 267 ntBASIC7.42□□□□□ -1.22
USP11P51784 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.42□□□□□ -1.22
USP11P51784 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.42□□□□□ -1.22
USP11P51784 AC068135.1-201ENST00000446164 246 ntBASIC7.42□□□□□ -1.22
USP11P51784 AP000936.2-201ENST00000447151 681 ntBASIC7.42□□□□□ -1.22
USP11P51784 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USP11P51784 RPS18P1-201ENST00000447840 458 ntBASIC7.42□□□□□ -1.22
USP11P51784 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.42□□□□□ -1.22
USP11P51784 MTCYBP1-201ENST00000454315 1119 ntBASIC7.42□□□□□ -1.22
USP11P51784 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.42□□□□□ -1.22
USP11P51784 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
USP11P51784 RN7SL836P-201ENST00000476140 296 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms