Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
BRCA2P51587 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
BRCA2P51587 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.72□□□□□ -1.49
BRCA2P51587 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
BRCA2P51587 AL139039.2-201ENST00000407436 479 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 AC109464.1-201ENST00000511091 819 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 AC106785.1-201ENST00000565935 262 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
BRCA2P51587 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.72□□□□□ -1.49
BRCA2P51587 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC5.72□□□□□ -1.49
BRCA2P51587 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.72□□□□□ -1.49
BRCA2P51587 RN7SKP145-201ENST00000363291 303 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.72□□□□□ -1.49
BRCA2P51587 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.72□□□□□ -1.49
BRCA2P51587 OR2B7P-201ENST00000429302 934 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 AP002812.1-201ENST00000495378 474 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.72□□□□□ -1.49
BRCA2P51587 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.72□□□□□ -1.49
BRCA2P51587 AC074101.1-201ENST00000637861 241 ntBASIC5.72□□□□□ -1.49
BRCA2P51587 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.72□□□□□ -1.49
BRCA2P51587 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRCA2P51587 MTCO1P15-201ENST00000529569 1526 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
BRCA2P51587 SNORD113.2-201ENST00000364166 89 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
BRCA2P51587 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.71□□□□□ -1.49
BRCA2P51587 AC016027.5-201ENST00000427227 210 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.71□□□□□ -1.49
BRCA2P51587 IGBP1P3-201ENST00000447449 1000 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.71□□□□□ -1.49
BRCA2P51587 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.71□□□□□ -1.49
BRCA2P51587 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.71□□□□□ -1.49
BRCA2P51587 AC006427.1-201ENST00000514359 712 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.71□□□□□ -1.49
BRCA2P51587 RPL12P25-202ENST00000598100 674 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.71□□□□□ -1.49
BRCA2P51587 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.71□□□□□ -1.49
BRCA2P51587 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
BRCA2P51587 AC034229.2-201ENST00000566945 2508 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.71□□□□□ -1.49
BRCA2P51587 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
BRCA2P51587 CASC19-260ENST00000641828 2001 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 RNU1-24P-201ENST00000364285 165 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 BX510359.2-201ENST00000417920 305 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 AL353748.1-201ENST00000440753 474 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.71□□□□□ -1.5
BRCA2P51587 AC007224.1-201ENST00000564410 144 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.71□□□□□ -1.5
BRCA2P51587 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC5.71□□□□□ -1.5
BRCA2P51587 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
BRCA2P51587 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.71□□□□□ -1.5
BRCA2P51587 Y_RNA.333-201ENST00000365274 102 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 RPSAP51-201ENST00000497462 645 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.71□□□□□ -1.5
BRCA2P51587 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.71□□□□□ -1.5
BRCA2P51587 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.71□□□□□ -1.5
BRCA2P51587 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.71□□□□□ -1.5
BRCA2P51587 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.71□□□□□ -1.5
BRCA2P51587 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.71□□□□□ -1.5
BRCA2P51587 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRCA2P51587 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRCA2P51587 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC5.7□□□□□ -1.5
BRCA2P51587 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRCA2P51587 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
BRCA2P51587 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRCA2P51587 IGKV7-3-201ENST00000357453 298 ntBASIC5.7□□□□□ -1.5
BRCA2P51587 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.7□□□□□ -1.5
BRCA2P51587 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.7□□□□□ -1.5
BRCA2P51587 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.7□□□□□ -1.5
BRCA2P51587 OR10T1P-201ENST00000424327 947 ntBASIC5.7□□□□□ -1.5
BRCA2P51587 DNAJA1P6-201ENST00000437347 354 ntBASIC5.7□□□□□ -1.5
BRCA2P51587 AC091912.1-201ENST00000511351 248 ntBASIC5.7□□□□□ -1.5
BRCA2P51587 PMS2P3-207ENST00000529061 717 ntBASIC5.7□□□□□ -1.5
BRCA2P51587 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.7□□□□□ -1.5
BRCA2P51587 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.7□□□□□ -1.5
BRCA2P51587 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.7□□□□□ -1.5
BRCA2P51587 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRCA2P51587 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
BRCA2P51587 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.7□□□□□ -1.5
BRCA2P51587 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms