Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RFC3P40938 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 AC021678.3-201ENST00000517893 476 ntBASIC5.24□□□□□ -1.57
RFC3P40938 MRPS16P1-201ENST00000523462 412 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.24□□□□□ -1.57
RFC3P40938 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 AC009852.2-201ENST00000567898 485 ntBASIC5.24□□□□□ -1.57
RFC3P40938 NPM1P45-201ENST00000583151 559 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.24□□□□□ -1.57
RFC3P40938 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC3P40938 AL022394.1-201ENST00000606979 292 ntBASIC5.24□□□□□ -1.57
RFC3P40938 AC079395.2-201ENST00000610982 737 ntBASIC5.24□□□□□ -1.57
RFC3P40938 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.24□□□□□ -1.57
RFC3P40938 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC3P40938 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC3P40938 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFC3P40938 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.24□□□□□ -1.57
RFC3P40938 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RFC3P40938 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC3P40938 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC3P40938 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
RFC3P40938 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFC3P40938 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFC3P40938 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 MARK2P12-201ENST00000420129 585 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC3P40938 AC012075.1-201ENST00000436549 580 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AL390119.1-201ENST00000440329 312 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AC015983.1-201ENST00000441577 373 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 AC005297.1-201ENST00000444765 862 ntBASIC5.23□□□□□ -1.57
RFC3P40938 GAPDHP14-201ENST00000450472 937 ntBASIC5.23□□□□□ -1.57
RFC3P40938 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC3P40938 FRG2FP-204ENST00000453982 852 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC3P40938 AL445687.2-201ENST00000458156 728 ntBASIC5.23□□□□□ -1.57
RFC3P40938 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.23□□□□□ -1.57
RFC3P40938 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
RFC3P40938 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 FTH1P11-201ENST00000517577 551 ntBASIC5.23□□□□□ -1.57
RFC3P40938 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC3P40938 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC3P40938 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC3P40938 AC007225.2-201ENST00000562529 256 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.23□□□□□ -1.57
RFC3P40938 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 AC010809.3-201ENST00000621310 641 ntBASIC5.23□□□□□ -1.57
RFC3P40938 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 AC027279.4-201ENST00000624371 2072 ntBASIC5.23□□□□□ -1.57
RFC3P40938 AL161756.3-201ENST00000641216 2071 ntBASIC5.23□□□□□ -1.57
RFC3P40938 BCORP1-203ENST00000513194 5093 ntBASIC5.23□□□□□ -1.57
RFC3P40938 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
RFC3P40938 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC3P40938 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 AC011933.2-201ENST00000578539 2790 ntBASIC5.22□□□□□ -1.57
RFC3P40938 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 RN7SKP160-201ENST00000363804 340 ntBASIC5.22□□□□□ -1.57
RFC3P40938 RN7SKP59-201ENST00000410520 314 ntBASIC5.22□□□□□ -1.57
RFC3P40938 AL596448.1-201ENST00000415024 392 ntBASIC5.22□□□□□ -1.57
RFC3P40938 GNG5P5-201ENST00000420444 220 ntBASIC5.22□□□□□ -1.57
RFC3P40938 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.22□□□□□ -1.57
RFC3P40938 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.22□□□□□ -1.57
RFC3P40938 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.22□□□□□ -1.57
RFC3P40938 RPS17P15-201ENST00000475609 349 ntBASIC5.22□□□□□ -1.57
RFC3P40938 SIAH1P1-201ENST00000479411 923 ntBASIC5.22□□□□□ -1.57
RFC3P40938 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC3P40938 AC138832.1-201ENST00000522871 556 ntBASIC5.22□□□□□ -1.57
RFC3P40938 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.22□□□□□ -1.57
RFC3P40938 AC090424.1-201ENST00000535243 736 ntBASIC5.22□□□□□ -1.57
RFC3P40938 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.22□□□□□ -1.57
RFC3P40938 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.22□□□□□ -1.57
RFC3P40938 IGBP1P1-201ENST00000554337 1009 ntBASIC5.22□□□□□ -1.57
RFC3P40938 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.22□□□□□ -1.57
RFC3P40938 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.22□□□□□ -1.57
RFC3P40938 NPM1P42-201ENST00000560329 862 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms