Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.56□□□□□ -1.52
RPA3P35244 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.56□□□□□ -1.52
RPA3P35244 HSPE1P2-201ENST00000554777 306 ntBASIC5.56□□□□□ -1.52
RPA3P35244 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.56□□□□□ -1.52
RPA3P35244 AC090888.3-201ENST00000558917 509 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AP001496.3-201ENST00000580230 913 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.56□□□□□ -1.52
RPA3P35244 AC015802.2-201ENST00000589690 189 ntBASIC5.56□□□□□ -1.52
RPA3P35244 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.56□□□□□ -1.52
RPA3P35244 AC108738.1-201ENST00000603703 237 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.56□□□□□ -1.52
RPA3P35244 AP001962.1-201ENST00000624114 559 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AC099654.11-201ENST00000638857 294 ntBASIC5.56□□□□□ -1.52
RPA3P35244 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 AC087565.3-203ENST00000641018 837 ntBASIC5.56□□□□□ -1.52
RPA3P35244 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.56□□□□□ -1.52
RPA3P35244 AL138820.1-201ENST00000617901 5305 ntBASIC5.56□□□□□ -1.52
RPA3P35244 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RPA3P35244 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 AC091305.2-201ENST00000624049 1576 ntBASIC5.55□□□□□ -1.52
RPA3P35244 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 AL022331.1-201ENST00000429025 477 ntBASIC5.55□□□□□ -1.52
RPA3P35244 GAPDHP34-201ENST00000432112 823 ntBASIC5.55□□□□□ -1.52
RPA3P35244 HMGB3P24-201ENST00000433260 622 ntBASIC5.55□□□□□ -1.52
RPA3P35244 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.55□□□□□ -1.52
RPA3P35244 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.55□□□□□ -1.52
RPA3P35244 RPS17P15-201ENST00000475609 349 ntBASIC5.55□□□□□ -1.52
RPA3P35244 EIF3LP3-201ENST00000495197 822 ntBASIC5.55□□□□□ -1.52
RPA3P35244 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.55□□□□□ -1.52
RPA3P35244 DUTP7-201ENST00000507982 486 ntBASIC5.55□□□□□ -1.52
RPA3P35244 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 AC021678.3-201ENST00000517893 476 ntBASIC5.55□□□□□ -1.52
RPA3P35244 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 NMNAT1P5-201ENST00000559657 841 ntBASIC5.55□□□□□ -1.52
RPA3P35244 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.55□□□□□ -1.52
RPA3P35244 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.55□□□□□ -1.52
RPA3P35244 AL356608.1-201ENST00000610034 820 ntBASIC5.55□□□□□ -1.52
RPA3P35244 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.55□□□□□ -1.52
RPA3P35244 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 AC022919.1-201ENST00000624979 626 ntBASIC5.55□□□□□ -1.52
RPA3P35244 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.55□□□□□ -1.52
RPA3P35244 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RPA3P35244 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.55□□□□□ -1.52
RPA3P35244 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
RPA3P35244 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RPA3P35244 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.55□□□□□ -1.52
RPA3P35244 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.55□□□□□ -1.52
RPA3P35244 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.54□□□□□ -1.52
RPA3P35244 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
RPA3P35244 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RPA3P35244 AC011755.1-201ENST00000623763 2049 ntBASIC5.54□□□□□ -1.52
RPA3P35244 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.54□□□□□ -1.52
RPA3P35244 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.54□□□□□ -1.52
RPA3P35244 OR56A4-201ENST00000330728 1209 ntBASIC5.54□□□□□ -1.52
RPA3P35244 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 RN7SKP186-201ENST00000365371 303 ntBASIC5.54□□□□□ -1.52
RPA3P35244 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.54□□□□□ -1.52
RPA3P35244 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.54□□□□□ -1.52
RPA3P35244 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RPA3P35244 AC090804.1-201ENST00000448870 490 ntBASIC5.54□□□□□ -1.52
RPA3P35244 AC009120.1-201ENST00000493458 473 ntBASIC5.54□□□□□ -1.52
RPA3P35244 IGBP1P4-201ENST00000503202 879 ntBASIC5.54□□□□□ -1.52
RPA3P35244 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.54□□□□□ -1.52
RPA3P35244 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.54□□□□□ -1.52
RPA3P35244 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.54□□□□□ -1.52
RPA3P35244 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.54□□□□□ -1.52
RPA3P35244 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.54□□□□□ -1.52
RPA3P35244 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.54□□□□□ -1.52
RPA3P35244 MIR4311-201ENST00000580794 100 ntBASIC5.54□□□□□ -1.52
RPA3P35244 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.54□□□□□ -1.52
RPA3P35244 AC015982.1-201ENST00000608113 465 ntBASIC5.54□□□□□ -1.52
RPA3P35244 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.54□□□□□ -1.52
RPA3P35244 RN7SL544P-201ENST00000617232 284 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms