Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
RFX1P22670 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.87□□□□□ -1.15
RFX1P22670 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 DCAF13P3-201ENST00000561147 1334 ntBASIC7.87□□□□□ -1.15
RFX1P22670 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 AC020978.6-201ENST00000571197 3177 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 AL359396.1-201ENST00000623151 2376 ntBASIC7.87□□□□□ -1.15
RFX1P22670 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 RNA5SP260-201ENST00000363849 111 ntBASIC7.87□□□□□ -1.15
RFX1P22670 SNORA4.1-201ENST00000364263 144 ntBASIC7.87□□□□□ -1.15
RFX1P22670 SNORA62.2-201ENST00000364672 152 ntBASIC7.87□□□□□ -1.15
RFX1P22670 RNA5SP396-201ENST00000364834 120 ntBASIC7.87□□□□□ -1.15
RFX1P22670 Y_RNA.408-201ENST00000383987 102 ntBASIC7.87□□□□□ -1.15
RFX1P22670 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 PIGPP2-201ENST00000411569 458 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AL662791.3-201ENST00000413771 776 ntBASIC7.87□□□□□ -1.15
RFX1P22670 RPL30P16-201ENST00000419341 429 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.87□□□□□ -1.15
RFX1P22670 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.87□□□□□ -1.15
RFX1P22670 AC002069.1-201ENST00000429649 1159 ntBASIC7.87□□□□□ -1.15
RFX1P22670 RPL31P54-201ENST00000429803 370 ntBASIC7.87□□□□□ -1.15
RFX1P22670 USP9YP35-201ENST00000435696 412 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 CACYBPP1-201ENST00000438592 684 ntBASIC7.87□□□□□ -1.15
RFX1P22670 HMGN1P32-201ENST00000441744 256 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 AL592447.1-201ENST00000447592 540 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.87□□□□□ -1.15
RFX1P22670 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.87□□□□□ -1.15
RFX1P22670 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.87□□□□□ -1.15
RFX1P22670 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.87□□□□□ -1.15
RFX1P22670 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 IGKV2D-10-201ENST00000520194 281 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.87□□□□□ -1.15
RFX1P22670 ST13P6-201ENST00000522430 1102 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.87□□□□□ -1.15
RFX1P22670 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.87□□□□□ -1.15
RFX1P22670 GTF2IP8-201ENST00000560687 584 ntBASIC7.87□□□□□ -1.15
RFX1P22670 UBE2CP4-201ENST00000561405 535 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC136619.2-201ENST00000563361 631 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.87□□□□□ -1.15
RFX1P22670 AP005262.1-201ENST00000582646 997 ntBASIC7.87□□□□□ -1.15
RFX1P22670 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.87□□□□□ -1.15
RFX1P22670 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RFX1P22670 AC019226.1-201ENST00000625666 515 ntBASIC7.87□□□□□ -1.15
RFX1P22670 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.87□□□□□ -1.15
RFX1P22670 AC011447.7-201ENST00000624228 1590 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC046144.1-201ENST00000478559 1853 ntBASIC7.87□□□□□ -1.15
RFX1P22670 AC068870.3-201ENST00000625077 2536 ntBASIC7.87□□□□□ -1.15
RFX1P22670 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.87□□□□□ -1.15
RFX1P22670 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 BX322650.1-201ENST00000332359 2143 ntBASIC7.87□□□□□ -1.15
RFX1P22670 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RFX1P22670 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.87□□□□□ -1.15
RFX1P22670 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.86□□□□□ -1.15
RFX1P22670 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
RFX1P22670 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RFX1P22670 OR52B5P-204ENST00000641744 3467 ntBASIC7.86□□□□□ -1.15
RFX1P22670 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms