Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ZNF90P1-201ENST00000480493 1951 ntBASIC7.55□□□□□ -1.2
LIG1P18858 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 AL390237.1-201ENST00000404226 1415 ntBASIC7.55□□□□□ -1.2
LIG1P18858 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LIG1P18858 MIR365B-201ENST00000362317 111 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RNU6-697P-201ENST00000363348 107 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 AC004022.2-201ENST00000413824 193 ntBASIC7.55□□□□□ -1.2
LIG1P18858 VN1R31P-201ENST00000417498 730 ntBASIC7.55□□□□□ -1.2
LIG1P18858 MTND4P3-201ENST00000417829 541 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 AC008173.1-201ENST00000418901 264 ntBASIC7.55□□□□□ -1.2
LIG1P18858 NAP1L4P2-201ENST00000425958 899 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.55□□□□□ -1.2
LIG1P18858 PA2G4P1-201ENST00000442248 1197 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AL360221.1-201ENST00000445989 335 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 OTX2P1-201ENST00000450956 354 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RN7SL372P-201ENST00000461982 298 ntBASIC7.55□□□□□ -1.2
LIG1P18858 PPP1R11P1-201ENST00000486095 376 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RN7SL350P-201ENST00000492591 299 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.55□□□□□ -1.2
LIG1P18858 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 AC113191.1-201ENST00000517759 403 ntBASIC7.55□□□□□ -1.2
LIG1P18858 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 MTCYBP41-201ENST00000528913 1123 ntBASIC7.55□□□□□ -1.2
LIG1P18858 OR8I1P-201ENST00000529291 931 ntBASIC7.55□□□□□ -1.2
LIG1P18858 OR5AM1P-201ENST00000532136 1032 ntBASIC7.55□□□□□ -1.2
LIG1P18858 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 CHEK2P2-201ENST00000554701 672 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.55□□□□□ -1.2
LIG1P18858 AL078623.1-201ENST00000602702 907 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RPL12P48-201ENST00000605620 304 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AL021707.7-201ENST00000607991 416 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AP001596.2-201ENST00000608410 312 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AC103591.3-201ENST00000608684 209 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AL138478.1-201ENST00000612252 832 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AC015540.1-201ENST00000615828 501 ntBASIC7.55□□□□□ -1.2
LIG1P18858 AC007490.1-201ENST00000624321 703 ntBASIC7.55□□□□□ -1.2
LIG1P18858 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 OR7E91P-202ENST00000642062 1198 ntBASIC7.55□□□□□ -1.2
LIG1P18858 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.55□□□□□ -1.2
LIG1P18858 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.54□□□□□ -1.2
LIG1P18858 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.54□□□□□ -1.2
LIG1P18858 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.54□□□□□ -1.2
LIG1P18858 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 ZNF806-201ENST00000438300 1774 ntBASIC7.54□□□□□ -1.2
LIG1P18858 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 RNU6-236P-201ENST00000363886 106 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RN7SKP130-201ENST00000364924 301 ntBASIC7.54□□□□□ -1.2
LIG1P18858 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 AC092634.1-201ENST00000366505 199 ntBASIC7.54□□□□□ -1.2
LIG1P18858 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
LIG1P18858 RAP1BP3-201ENST00000407180 549 ntBASIC7.54□□□□□ -1.2
LIG1P18858 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.54□□□□□ -1.2
LIG1P18858 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.54□□□□□ -1.2
LIG1P18858 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms