Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 AL157777.1-201ENST00000468100 304 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC3.33□□□□□ -1.88
PDE6GP18545 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PDE6GP18545 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC3.33□□□□□ -1.88
PDE6GP18545 NIFKP7-201ENST00000503365 834 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 STMN1P2-201ENST00000508435 439 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 AC095052.1-201ENST00000509955 863 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.33□□□□□ -1.88
PDE6GP18545 SETP21-201ENST00000514799 892 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 AC027308.1-201ENST00000517993 110 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
PDE6GP18545 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.33□□□□□ -1.88
PDE6GP18545 AC107993.1-201ENST00000591343 684 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
PDE6GP18545 AC244107.2-201ENST00000611773 76 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC3.33□□□□□ -1.88
PDE6GP18545 AP005431.1-201ENST00000618479 319 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 AC133485.6-201ENST00000624045 688 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.33□□□□□ -1.88
PDE6GP18545 AC099654.6-201ENST00000636487 512 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.33□□□□□ -1.88
PDE6GP18545 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.33□□□□□ -1.88
PDE6GP18545 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PDE6GP18545 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.33□□□□□ -1.88
PDE6GP18545 MIPEPP2-201ENST00000422560 1819 ntBASIC3.33□□□□□ -1.88
PDE6GP18545 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PDE6GP18545 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDE6GP18545 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 AC068870.1-201ENST00000563737 2455 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PDE6GP18545 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 IL6STP1-201ENST00000346911 1020 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AC005294.1-201ENST00000355509 281 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 RNA5SP223-201ENST00000365174 120 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 MIR614-201ENST00000385082 90 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 EEF1GP6-201ENST00000402309 905 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 SNX18P13-201ENST00000412442 529 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 Z93019.1-201ENST00000416450 973 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AC002367.1-201ENST00000416765 405 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AL360013.1-201ENST00000419031 858 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AL359633.1-201ENST00000421403 310 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 KIF4CP-201ENST00000422742 1279 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 ELOBP4-201ENST00000423418 296 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 OSTCP4-201ENST00000424397 449 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 AKR1B10P1-201ENST00000425765 942 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 NMNAT1P2-201ENST00000435192 860 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 AL445466.1-201ENST00000448432 357 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 RN7SL456P-201ENST00000469290 295 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC3.32□□□□□ -1.88
PDE6GP18545 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC3.32□□□□□ -1.88
PDE6GP18545 AC113430.1-201ENST00000506872 718 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.32□□□□□ -1.88
PDE6GP18545 AC134698.5-201ENST00000519444 336 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 MAL2-207ENST00000522828 603 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 AC010287.1-201ENST00000566916 357 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 AC126323.4-201ENST00000566935 234 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 LINC00556-201ENST00000569603 412 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 RPL29P33-201ENST00000587474 316 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 AC018558.4-201ENST00000622153 281 ntBASIC3.32□□□□□ -1.88
PDE6GP18545 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC3.32□□□□□ -1.88
PDE6GP18545 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.32□□□□□ -1.88
PDE6GP18545 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC3.32□□□□□ -1.88
PDE6GP18545 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDE6GP18545 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms