Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 EIF3LP2-201ENST00000457262 807 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 AC023050.1-201ENST00000498198 304 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC025459.1-201ENST00000504072 156 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC131392.1-201ENST00000506490 633 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 MTND4P2-201ENST00000507767 1203 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 AC119751.1-201ENST00000513357 765 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 SCARNA5-201ENST00000516201 276 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 SNORA31.13-201ENST00000516624 135 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.45□□□□□ -1.38
COL6A2P12110 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC013701.1-201ENST00000522657 465 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AP003461.1-201ENST00000528866 78 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC006518.2-201ENST00000542513 940 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.45□□□□□ -1.38
COL6A2P12110 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC090826.1-203ENST00000569235 490 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC015688.2-201ENST00000584523 262 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 AL021707.7-201ENST00000607991 416 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 MIR7854-201ENST00000620068 65 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AL121985.3-201ENST00000620690 523 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC007347.2-201ENST00000623044 180 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 RPL23AP61-201ENST00000623642 466 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC010401.2-201ENST00000575137 4934 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 BX005019.1-201ENST00000561881 1810 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 AC005225.5-201ENST00000623547 2225 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 ELL2P3-201ENST00000457883 1602 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC068769.1-201ENST00000474767 2426 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 RNA5SP152-201ENST00000365184 110 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL117344.1-201ENST00000407196 616 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 HMGA1P8-201ENST00000414130 321 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL6A2P12110 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 SPATA20P1-201ENST00000423089 438 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 OR13K1P-201ENST00000444577 975 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AL050341.1-201ENST00000447743 313 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.44□□□□□ -1.38
COL6A2P12110 RPL36AP55-201ENST00000454114 305 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL6A2P12110 RPL5P13-201ENST00000462840 709 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AF305872.1-201ENST00000485217 471 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 RN7SL868P-201ENST00000485915 303 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC117532.1-201ENST00000514638 323 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 TMEM97P2-201ENST00000517841 403 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC008429.2-201ENST00000523057 864 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 RBMS2P1-201ENST00000525031 1226 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 AP001804.1-201ENST00000526868 919 ntBASIC6.44□□□□□ -1.38
COL6A2P12110 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.44□□□□□ -1.38
COL6A2P12110 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.44□□□□□ -1.38
COL6A2P12110 AC024909.2-201ENST00000553035 286 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms