Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 BRD7P6-201ENST00000431406 1860 ntBASIC9.32□□□□□ -0.92
TOP2AP11388 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.32□□□□□ -0.92
TOP2AP11388 OR2AM1P-201ENST00000422137 422 ntBASIC9.32□□□□□ -0.92
TOP2AP11388 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC9.32□□□□□ -0.92
TOP2AP11388 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC9.32□□□□□ -0.92
TOP2AP11388 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC9.32□□□□□ -0.92
TOP2AP11388 AC005000.1-201ENST00000536192 288 ntBASIC9.32□□□□□ -0.92
TOP2AP11388 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 ZNF969P-201ENST00000510345 2341 ntBASIC9.32□□□□□ -0.92
TOP2AP11388 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.32□□□□□ -0.92
TOP2AP11388 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC9.32□□□□□ -0.92
TOP2AP11388 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
TOP2AP11388 AC008072.1-201ENST00000434254 824 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.31□□□□□ -0.92
TOP2AP11388 RN7SL459P-201ENST00000481078 302 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 CEACAMP10-202ENST00000495431 496 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC9.31□□□□□ -0.92
TOP2AP11388 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC9.31□□□□□ -0.92
TOP2AP11388 AC079075.1-201ENST00000559543 878 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.31□□□□□ -0.92
TOP2AP11388 AL356752.1-201ENST00000615844 593 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 NAA60-237ENST00000615865 326 ntTSL 5 BASIC9.31□□□□□ -0.92
TOP2AP11388 AC005225.5-201ENST00000623547 2225 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 IRF5P1-201ENST00000504852 2164 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 CASC19-221ENST00000641309 1382 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 AC132825.1-201ENST00000463573 2247 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 AC012618.3-205ENST00000637896 1496 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 AC011933.2-201ENST00000578539 2790 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC9.31□□□□□ -0.92
TOP2AP11388 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
TOP2AP11388 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC9.31□□□□□ -0.92
TOP2AP11388 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC9.31□□□□□ -0.92
TOP2AP11388 RPL5P22-201ENST00000480199 884 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 KRTAP5-14P-201ENST00000502328 121 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 BTF3P13-201ENST00000513224 490 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 GAPDHP62-201ENST00000515313 990 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC9.31□□□□□ -0.92
TOP2AP11388 AL031320.1-201ENST00000604177 357 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AC244107.2-201ENST00000611773 76 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AC105105.5-201ENST00000622635 1294 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 AP000346.3-201ENST00000622821 210 ntBASIC9.31□□□□□ -0.92
TOP2AP11388 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
TOP2AP11388 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 AC008124.1-201ENST00000609803 9730 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 AL359715.3-201ENST00000569267 2123 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
TOP2AP11388 AC010329.1-201ENST00000593903 8328 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC9.3□□□□□ -0.92
TOP2AP11388 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC9.3□□□□□ -0.92
TOP2AP11388 RNA5SP428-201ENST00000365129 132 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 RNA5SP455-201ENST00000365190 119 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 AC092017.2-201ENST00000427600 362 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC9.3□□□□□ -0.92
TOP2AP11388 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC9.3□□□□□ -0.92
TOP2AP11388 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC9.3□□□□□ -0.92
TOP2AP11388 OR7H2P-201ENST00000513483 306 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.3□□□□□ -0.92
TOP2AP11388 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC9.3□□□□□ -0.92
TOP2AP11388 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC9.3□□□□□ -0.92
TOP2AP11388 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TOP2AP11388 AC068790.4-201ENST00000602474 263 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 AC087283.1-201ENST00000604029 1074 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 AC005252.1-201ENST00000604518 1063 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.3□□□□□ -0.92
TOP2AP11388 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TOP2AP11388 MIR7641-1-201ENST00000627518 61 ntBASIC9.3□□□□□ -0.92
TOP2AP11388 NEK3-211ENST00000629912 141 ntTSL 5 BASIC9.3□□□□□ -0.92
TOP2AP11388 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TOP2AP11388 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TOP2AP11388 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
TOP2AP11388 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TOP2AP11388 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms