Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.25□□□□□ -1.41
MMP3P08254 MORF4L2P1-201ENST00000503761 858 ntBASIC6.25□□□□□ -1.41
MMP3P08254 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 RPEP1-201ENST00000504507 658 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.25□□□□□ -1.41
MMP3P08254 RN7SKP99-201ENST00000517028 307 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.25□□□□□ -1.41
MMP3P08254 HNRNPRP2-201ENST00000528421 743 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC027667.1-201ENST00000545814 304 ntBASIC6.25□□□□□ -1.41
MMP3P08254 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.25□□□□□ -1.41
MMP3P08254 OR7A8P-201ENST00000595427 913 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC092953.2-201ENST00000608000 699 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.25□□□□□ -1.41
MMP3P08254 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 AL731532.1-201ENST00000623972 4236 ntBASIC6.24□□□□□ -1.41
MMP3P08254 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 MIR551A-201ENST00000385042 96 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AC106901.1-201ENST00000425086 698 ntBASIC6.24□□□□□ -1.41
MMP3P08254 OR52B5P-201ENST00000435337 951 ntBASIC6.24□□□□□ -1.41
MMP3P08254 RPS3AP38-201ENST00000435889 763 ntBASIC6.24□□□□□ -1.41
MMP3P08254 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AC245047.2-201ENST00000441060 530 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 MEMO1P4-201ENST00000453590 386 ntBASIC6.24□□□□□ -1.41
MMP3P08254 RN7SL222P-201ENST00000476452 299 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 RPS23P1-201ENST00000491662 432 ntBASIC6.24□□□□□ -1.41
MMP3P08254 RPL37AP8-201ENST00000494116 276 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.24□□□□□ -1.41
MMP3P08254 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.24□□□□□ -1.41
MMP3P08254 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.24□□□□□ -1.41
MMP3P08254 AC139697.1-201ENST00000548429 745 ntBASIC6.24□□□□□ -1.41
MMP3P08254 BLZF2P-201ENST00000553776 1130 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AC007342.5-201ENST00000571340 2142 ntBASIC6.24□□□□□ -1.41
MMP3P08254 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.24□□□□□ -1.41
MMP3P08254 AC092474.3-201ENST00000603022 568 ntBASIC6.24□□□□□ -1.41
MMP3P08254 KATNBL1P1-201ENST00000605192 748 ntBASIC6.24□□□□□ -1.41
MMP3P08254 SNORA35B-201ENST00000607417 129 ntBASIC6.24□□□□□ -1.41
MMP3P08254 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 AC091948.2-201ENST00000636510 279 ntBASIC6.24□□□□□ -1.41
MMP3P08254 OR52B5P-202ENST00000641118 1110 ntBASIC6.24□□□□□ -1.41
MMP3P08254 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 AC022164.1-201ENST00000568767 2673 ntBASIC6.24□□□□□ -1.41
MMP3P08254 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
MMP3P08254 AC099654.3-201ENST00000447087 1546 ntBASIC6.24□□□□□ -1.41
MMP3P08254 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 AC016251.2-201ENST00000623393 3089 ntBASIC6.24□□□□□ -1.41
MMP3P08254 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
MMP3P08254 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
MMP3P08254 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
MMP3P08254 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MMP3P08254 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
MMP3P08254 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 RN7SKP6-201ENST00000364795 319 ntBASIC6.23□□□□□ -1.41
MMP3P08254 RNU6-316P-201ENST00000391027 107 ntBASIC6.23□□□□□ -1.41
MMP3P08254 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 AL133325.1-201ENST00000421090 382 ntBASIC6.23□□□□□ -1.41
MMP3P08254 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.23□□□□□ -1.41
MMP3P08254 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MMP3P08254 CRIP1P1-201ENST00000427567 185 ntBASIC6.23□□□□□ -1.41
MMP3P08254 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.23□□□□□ -1.41
MMP3P08254 FAR2P1-206ENST00000449736 709 ntBASIC6.23□□□□□ -1.41
MMP3P08254 AURKAPS1-201ENST00000451805 1212 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms