Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM3P06753 RPA2P1-201ENST00000556557 721 ntBASIC6.19□□□□□ -1.42
TPM3P06753 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM3P06753 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.19□□□□□ -1.42
TPM3P06753 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM3P06753 MIR4311-201ENST00000580794 100 ntBASIC6.19□□□□□ -1.42
TPM3P06753 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM3P06753 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM3P06753 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.19□□□□□ -1.42
TPM3P06753 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.19□□□□□ -1.42
TPM3P06753 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM3P06753 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM3P06753 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM3P06753 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM3P06753 ZNF652P1-201ENST00000442420 1309 ntBASIC6.19□□□□□ -1.42
TPM3P06753 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
TPM3P06753 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM3P06753 PDZK1P1-202ENST00000425209 1350 ntBASIC6.18□□□□□ -1.42
TPM3P06753 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.18□□□□□ -1.42
TPM3P06753 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 AC068870.1-201ENST00000563737 2455 ntBASIC6.18□□□□□ -1.42
TPM3P06753 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.18□□□□□ -1.42
TPM3P06753 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TPM3P06753 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM3P06753 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 AC098847.1-201ENST00000473094 348 ntBASIC6.18□□□□□ -1.42
TPM3P06753 IMPA1P1-201ENST00000510718 842 ntBASIC6.18□□□□□ -1.42
TPM3P06753 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM3P06753 SCARNA18.1-201ENST00000516330 83 ntBASIC6.18□□□□□ -1.42
TPM3P06753 RNA5SP441-201ENST00000516809 88 ntBASIC6.18□□□□□ -1.42
TPM3P06753 AC139365.2-201ENST00000517972 253 ntBASIC6.18□□□□□ -1.42
TPM3P06753 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM3P06753 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.18□□□□□ -1.42
TPM3P06753 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM3P06753 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.18□□□□□ -1.42
TPM3P06753 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.18□□□□□ -1.42
TPM3P06753 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TPM3P06753 AC114947.2-201ENST00000565748 2125 ntBASIC6.18□□□□□ -1.42
TPM3P06753 AC004232.2-201ENST00000574245 821 ntBASIC6.18□□□□□ -1.42
TPM3P06753 DPRXP4-201ENST00000578053 568 ntBASIC6.18□□□□□ -1.42
TPM3P06753 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.18□□□□□ -1.42
TPM3P06753 AC015819.1-201ENST00000613588 663 ntBASIC6.18□□□□□ -1.42
TPM3P06753 AC004801.6-201ENST00000616571 978 ntBASIC6.18□□□□□ -1.42
TPM3P06753 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.18□□□□□ -1.42
TPM3P06753 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.18□□□□□ -1.42
TPM3P06753 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 PSG10P-201ENST00000501199 1500 ntBASIC6.18□□□□□ -1.42
TPM3P06753 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.18□□□□□ -1.42
TPM3P06753 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TPM3P06753 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TPM3P06753 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM3P06753 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM3P06753 MTND5P12-201ENST00000502851 1449 ntBASIC6.17□□□□□ -1.42
TPM3P06753 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM3P06753 AC093225.1-201ENST00000506867 1408 ntBASIC6.17□□□□□ -1.42
TPM3P06753 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM3P06753 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM3P06753 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TPM3P06753 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.17□□□□□ -1.42
TPM3P06753 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TPM3P06753 MIR551B-201ENST00000384984 96 ntBASIC6.17□□□□□ -1.42
TPM3P06753 OOSP1-201ENST00000398992 1270 ntBASIC6.17□□□□□ -1.42
TPM3P06753 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.17□□□□□ -1.42
TPM3P06753 RN7SKP146-201ENST00000410242 334 ntBASIC6.17□□□□□ -1.42
TPM3P06753 SETP15-201ENST00000412724 337 ntBASIC6.17□□□□□ -1.42
TPM3P06753 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM3P06753 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM3P06753 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TPM3P06753 LINC00328-2P-201ENST00000436585 219 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM3P06753 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.17□□□□□ -1.42
TPM3P06753 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.17□□□□□ -1.42
TPM3P06753 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.17□□□□□ -1.42
TPM3P06753 AL157385.1-201ENST00000446973 268 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AL596266.1-201ENST00000448132 400 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM3P06753 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM3P06753 AC093166.4-201ENST00000457867 318 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AL122020.1-201ENST00000472287 459 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.17□□□□□ -1.42
TPM3P06753 AC113191.1-201ENST00000517759 403 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AC100784.1-201ENST00000522790 310 ntBASIC6.17□□□□□ -1.42
TPM3P06753 AC130364.2-201ENST00000528639 604 ntBASIC6.17□□□□□ -1.42
TPM3P06753 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms