Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.46□□□□□ -1.37
COL4A1P02462 AC008072.1-201ENST00000434254 824 ntBASIC6.46□□□□□ -1.37
COL4A1P02462 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.46□□□□□ -1.37
COL4A1P02462 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.46□□□□□ -1.37
COL4A1P02462 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A1P02462 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.46□□□□□ -1.37
COL4A1P02462 GCSHP4-201ENST00000538792 439 ntBASIC6.46□□□□□ -1.37
COL4A1P02462 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.46□□□□□ -1.37
COL4A1P02462 AC079075.1-201ENST00000559543 878 ntBASIC6.46□□□□□ -1.37
COL4A1P02462 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A1P02462 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL4A1P02462 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A1P02462 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.46□□□□□ -1.38
COL4A1P02462 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 EPS15P1-202ENST00000459691 2071 ntBASIC6.46□□□□□ -1.38
COL4A1P02462 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL4A1P02462 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.46□□□□□ -1.38
COL4A1P02462 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.46□□□□□ -1.38
COL4A1P02462 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A1P02462 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL4A1P02462 RNA5SP428-201ENST00000365129 132 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A1P02462 RN7SL188P-201ENST00000469842 285 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 GSTP1P1-201ENST00000548078 319 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A1P02462 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
COL4A1P02462 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A1P02462 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL4A1P02462 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A1P02462 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A1P02462 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL4A1P02462 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 NXF4-202ENST00000416098 1465 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 RNA5SP505-201ENST00000364748 108 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A1P02462 AL590399.2-201ENST00000427536 309 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A1P02462 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A1P02462 AC093827.1-201ENST00000480094 861 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 RN7SL814P-201ENST00000487715 300 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A1P02462 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A1P02462 SEPT10P1-201ENST00000517342 1162 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A1P02462 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A1P02462 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A1P02462 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A1P02462 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 AL031320.1-201ENST00000604177 357 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 MIR378J-201ENST00000611988 109 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 AC091905.4-201ENST00000623432 202 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 AC099654.6-201ENST00000636487 512 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
COL4A1P02462 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A1P02462 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A1P02462 AC034229.2-201ENST00000566945 2508 ntBASIC6.45□□□□□ -1.38
COL4A1P02462 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL4A1P02462 AC079097.1-201ENST00000512187 1399 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A1P02462 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A1P02462 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 AC132825.1-201ENST00000463573 2247 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COL4A1P02462 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A1P02462 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A1P02462 RNA5SP90-201ENST00000364801 99 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 COX6B1P1-201ENST00000415962 213 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A1P02462 OR2AM1P-201ENST00000422137 422 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A1P02462 AC093890.1-201ENST00000502554 540 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 MRPS33P2-201ENST00000507850 322 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A1P02462 RNA5SP43-201ENST00000516559 110 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 BNIP3P1-201ENST00000547295 580 ntBASIC6.44□□□□□ -1.38
COL4A1P02462 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
COL4A1P02462 MIR3934-201ENST00000579806 107 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms