Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC137056.2-201ENST00000624055 1958 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFP01375 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TNFP01375 RNA5SP183-201ENST00000362452 119 ntBASIC5.39□□□□□ -1.55
TNFP01375 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 SPTLC1P2-201ENST00000407089 121 ntBASIC5.39□□□□□ -1.55
TNFP01375 SNORA11B-201ENST00000408175 129 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 OR10T1P-201ENST00000424327 947 ntBASIC5.39□□□□□ -1.55
TNFP01375 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 KRT8P51-201ENST00000438938 274 ntBASIC5.39□□□□□ -1.55
TNFP01375 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 AL451063.1-201ENST00000450164 1133 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 OR5M14P-201ENST00000506803 618 ntBASIC5.39□□□□□ -1.55
TNFP01375 HMGB1P44-201ENST00000508597 572 ntBASIC5.39□□□□□ -1.55
TNFP01375 MTND6P2-201ENST00000512226 524 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.39□□□□□ -1.55
TNFP01375 HMGB1P40-201ENST00000525121 540 ntBASIC5.39□□□□□ -1.55
TNFP01375 AP003080.1-202ENST00000526526 915 ntBASIC5.39□□□□□ -1.55
TNFP01375 OR5AM1P-201ENST00000532136 1032 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFP01375 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFP01375 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.39□□□□□ -1.55
TNFP01375 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 MIR4443-201ENST00000585052 53 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC092944.2-201ENST00000605443 889 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC016769.4-201ENST00000616893 535 ntBASIC5.39□□□□□ -1.55
TNFP01375 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.39□□□□□ -1.55
TNFP01375 SAMMSON-227ENST00000642114 1199 ntBASIC5.39□□□□□ -1.55
TNFP01375 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TNFP01375 AC011933.2-201ENST00000578539 2790 ntBASIC5.39□□□□□ -1.55
TNFP01375 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TNFP01375 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 AP004289.1-201ENST00000436307 2205 ntBASIC5.39□□□□□ -1.55
TNFP01375 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
TNFP01375 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 TTC41P-205ENST00000551270 3963 ntBASIC5.39□□□□□ -1.55
TNFP01375 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.38□□□□□ -1.55
TNFP01375 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.38□□□□□ -1.55
TNFP01375 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 ZNF402P-201ENST00000404435 3100 ntBASIC5.38□□□□□ -1.55
TNFP01375 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 SNORA74A-201ENST00000364089 198 ntBASIC5.38□□□□□ -1.55
TNFP01375 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 AC016769.2-201ENST00000414815 475 ntBASIC5.38□□□□□ -1.55
TNFP01375 AL139148.1-201ENST00000427122 680 ntBASIC5.38□□□□□ -1.55
TNFP01375 NANOGP4-201ENST00000427230 913 ntBASIC5.38□□□□□ -1.55
TNFP01375 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 RPS26P41-201ENST00000450370 284 ntBASIC5.38□□□□□ -1.55
TNFP01375 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFP01375 AC128716.1-201ENST00000475129 166 ntBASIC5.38□□□□□ -1.55
TNFP01375 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFP01375 AC079841.1-201ENST00000481228 950 ntBASIC5.38□□□□□ -1.55
TNFP01375 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 RPEP1-201ENST00000504507 658 ntBASIC5.38□□□□□ -1.55
TNFP01375 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 RN7SKP67-201ENST00000515905 235 ntBASIC5.38□□□□□ -1.55
TNFP01375 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.38□□□□□ -1.55
TNFP01375 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.38□□□□□ -1.55
TNFP01375 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFP01375 AP001267.4-201ENST00000602598 545 ntBASIC5.38□□□□□ -1.55
TNFP01375 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.38□□□□□ -1.55
TNFP01375 AC021422.1-201ENST00000621212 473 ntBASIC5.38□□□□□ -1.55
TNFP01375 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 AC013268.3-201ENST00000262716 2324 ntBASIC5.38□□□□□ -1.55
TNFP01375 CR383656.5-201ENST00000547616 1340 ntBASIC5.38□□□□□ -1.55
TNFP01375 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.38□□□□□ -1.55
TNFP01375 AC068870.1-201ENST00000563737 2455 ntBASIC5.38□□□□□ -1.55
TNFP01375 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TNFP01375 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFP01375 AC007938.2-201ENST00000604666 2634 ntBASIC5.38□□□□□ -1.55
TNFP01375 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TNFP01375 UGT2B24P-201ENST00000514441 1597 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms