Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC003001.2-201ENST00000616294 831 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AL355974.3-201ENST00000617383 467 ntBASIC5.65□□□□□ -1.5
LDLRP01130 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 AL512652.1-201ENST00000619006 500 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AC096708.4-201ENST00000620563 552 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LDLRP01130 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LDLRP01130 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
LDLRP01130 ADAM24P-201ENST00000398655 2101 ntBASIC5.65□□□□□ -1.51
LDLRP01130 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.65□□□□□ -1.51
LDLRP01130 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LDLRP01130 AC027279.1-201ENST00000568885 4284 ntBASIC5.65□□□□□ -1.51
LDLRP01130 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.65□□□□□ -1.51
LDLRP01130 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LDLRP01130 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LDLRP01130 MYL6P5-201ENST00000412707 459 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.64□□□□□ -1.51
LDLRP01130 SEC63P1-201ENST00000425785 1258 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
LDLRP01130 RPS27AP6-201ENST00000427962 448 ntBASIC5.64□□□□□ -1.51
LDLRP01130 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 Z85994.2-201ENST00000434327 452 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.64□□□□□ -1.51
LDLRP01130 PPIAP10-201ENST00000438675 458 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.64□□□□□ -1.51
LDLRP01130 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.64□□□□□ -1.51
LDLRP01130 RPL36AP39-201ENST00000445859 318 ntBASIC5.64□□□□□ -1.51
LDLRP01130 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AL133351.3-201ENST00000454998 193 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.64□□□□□ -1.51
LDLRP01130 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 ASNSP4-201ENST00000511103 447 ntBASIC5.64□□□□□ -1.51
LDLRP01130 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.64□□□□□ -1.51
LDLRP01130 AC114781.3-201ENST00000512083 142 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC112191.2-201ENST00000522428 333 ntBASIC5.64□□□□□ -1.51
LDLRP01130 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.64□□□□□ -1.51
LDLRP01130 AC079600.1-201ENST00000550326 297 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.64□□□□□ -1.51
LDLRP01130 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 MIR4700-201ENST00000578311 74 ntBASIC5.64□□□□□ -1.51
LDLRP01130 MIR1273E-201ENST00000581165 102 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 AC090236.2-201ENST00000587933 1101 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.64□□□□□ -1.51
LDLRP01130 RN7SL787P-201ENST00000613000 284 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AL109620.1-201ENST00000618738 1197 ntBASIC5.64□□□□□ -1.51
LDLRP01130 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.64□□□□□ -1.51
LDLRP01130 AC005618.4-201ENST00000625053 554 ntBASIC5.64□□□□□ -1.51
LDLRP01130 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
LDLRP01130 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.64□□□□□ -1.51
LDLRP01130 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LDLRP01130 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LDLRP01130 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LDLRP01130 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.63□□□□□ -1.51
LDLRP01130 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LDLRP01130 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LDLRP01130 RNA5SP375-201ENST00000362975 119 ntBASIC5.63□□□□□ -1.51
LDLRP01130 RNU1-49P-201ENST00000363468 159 ntBASIC5.63□□□□□ -1.51
LDLRP01130 RNA5SP346-201ENST00000363541 121 ntBASIC5.63□□□□□ -1.51
LDLRP01130 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LDLRP01130 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.63□□□□□ -1.51
LDLRP01130 RPL11P3-201ENST00000395256 523 ntBASIC5.63□□□□□ -1.51
LDLRP01130 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 RN7SKP121-201ENST00000410842 305 ntBASIC5.63□□□□□ -1.51
LDLRP01130 SDHDP6-201ENST00000414693 480 ntBASIC5.63□□□□□ -1.51
LDLRP01130 RPS7P14-201ENST00000426405 583 ntBASIC5.63□□□□□ -1.51
LDLRP01130 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.63□□□□□ -1.51
LDLRP01130 AC114878.1-201ENST00000441166 358 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AL163193.1-201ENST00000444895 788 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.63□□□□□ -1.51
LDLRP01130 FRG2FP-204ENST00000453982 852 ntBASIC5.63□□□□□ -1.51
LDLRP01130 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms